RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 TBC1D29Q9UFV1 150 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 PISDQ9UG56 409 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 RSPH14Q9UHP6 348 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 REXO2Q9Y3B8 237 aaKnown RBP4.73□□□□□ -1.65
CLK3-219ENST00000567805 PKP3Q9Y446 797 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 PRKAB1Q9Y478 270 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 SPO11Q9Y5K1 396 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 PCYT1BQ9Y5K3 369 aaPredicted RBP4.73□□□□□ -1.65
CLK3-219ENST00000567805 DUSP10Q9Y6W6 482 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 PTPRQQ9UMZ3 2332 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 TRBV23OR9-2A0A075B6M9 112 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 PRAMEF33A0A0G2JMD5 474 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 MACROD2A1Z1Q3 448 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 GRID2IPA4D2P6 1211 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 C9orf172C9J069 976 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.72□□□□□ -1.65
CLK3-219ENST00000567805 C3orf80F5H4A9 247 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 K7ENP7 123 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 ATXN7O15265 892 aaPredicted RBP4.72□□□□□ -1.65
CLK3-219ENST00000567805 SNX2O60749 519 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 PRAMEF10O60809 474 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 ANXA9O76027 345 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 STK10O94804 968 aaKnown RBP4.72□□□□□ -1.65
CLK3-219ENST00000567805 CDK14O94921 469 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 RBP3P10745 1247 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 THRAP10827 490 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 LIPCP11150 499 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 ZNF7P17097 686 aaPredicted RBP4.72□□□□□ -1.65
CLK3-219ENST00000567805 VCLP18206 1134 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 XRCC1P18887 633 aaPredicted RBP4.72□□□□□ -1.65
CLK3-219ENST00000567805 ITIH1P19827 911 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 CD82P27701 267 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 RBL1P28749 1068 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 CDC25BP30305 580 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 CSF2RBP32927 897 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 CSTF2P33240 577 aaKnown RBP eCLIP4.72□□□□□ -1.65
CLK3-219ENST00000567805 SPAM1P38567 509 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 ETV5P41161 510 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 CHRNA4P43681 627 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 MAPK10P53779 464 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 EPHA4P54764 986 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 GEMP55040 296 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 PRSS12P56730 875 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 EIF3EP60228 445 aaKnown RBP4.72□□□□□ -1.65
CLK3-219ENST00000567805 OTUD4Q01804 1114 aaKnown RBP4.72□□□□□ -1.65
CLK3-219ENST00000567805 RHDQ02161 417 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 CFHR1Q03591 330 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 KIF5AQ12840 1032 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 TMEM115Q12893 351 aaPredicted RBP4.72□□□□□ -1.65
CLK3-219ENST00000567805 ITGA9Q13797 1035 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 GTF2H3Q13889 308 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 PRPSAP1Q14558 356 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 C16orf72Q14CZ0 275 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 INSCQ1MX18 579 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 ATP13A5Q4VNC0 1218 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 ANKRD20A2Q5SQ80 823 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 LDLRAP1Q5SW96 308 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 ZNF648Q5T619 568 aaPredicted RBP4.72□□□□□ -1.65
CLK3-219ENST00000567805 ARHGAP40Q5TG30 622 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 ANKRD20A1Q5TYW2 823 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 ANKRD20A3Q5VUR7 823 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 NKAIN2Q5VXU1 208 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 TMEM71Q6P5X7 295 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 INO80CQ6PI98 192 aaPredicted RBP4.72□□□□□ -1.65
CLK3-219ENST00000567805 CRTC3Q6UUV7 619 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 ZNF574Q6ZN55 896 aaPredicted RBP4.72□□□□□ -1.65
CLK3-219ENST00000567805 CCDC81Q6ZN84 652 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 USP53Q70EK8 1073 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 ADGRG6Q86SQ4 1221 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 KIAA1328Q86T90 577 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 TMEM139Q8IV31 216 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 CDKL3Q8IVW4 592 aaPredicted RBP4.72□□□□□ -1.65
CLK3-219ENST00000567805 SYCE1Q8N0S2 351 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 TTC30BQ8N4P2 665 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 SLC25A41Q8N5S1 370 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 UBL4BQ8N7F7 174 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 LRRC57Q8N9N7 239 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 AGBL5Q8NDL9 886 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 RCBTB1Q8NDN9 531 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 ACRBPQ8NEB7 543 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 CCDC112Q8NEF3 446 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 IPMKQ8NFU5 416 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 ACTL9Q8TC94 416 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 BRSK1Q8TDC3 778 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 BLOC1S5Q8TDH9 187 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 USP7Q93009 1102 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 LRRC45Q96CN5 670 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 OXNAD1Q96HP4 312 aaPredicted RBP4.72□□□□□ -1.65
CLK3-219ENST00000567805 CCDC74BQ96LY2 380 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 TAAR9Q96RI9 348 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 CCNL2Q96S94 520 aaPredicted RBP4.72□□□□□ -1.65
CLK3-219ENST00000567805 ZCCHC2Q9C0B9 1178 aaKnown RBP4.72□□□□□ -1.65
CLK3-219ENST00000567805 LACRTQ9GZZ8 138 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 OSGEPL1Q9H4B0 414 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 EPB41L1Q9H4G0 881 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 UCK1Q9HA47 277 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 BPIFA1Q9NP55 256 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 ARFGAP3Q9NP61 516 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 IL26Q9NPH9 171 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 PRDM8Q9NQV8 689 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms