RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 USP27XA6NNY8 438 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 PDZK1P1A8MUH7 402 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 STX7O15400 261 aaKnown RBP13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 ZW10O43264 779 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 KIF5CO60282 957 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 ZNF189O75820 626 aaPredicted RBP13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 ANXA9O76027 345 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 CDK14O94921 469 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 EPOP01588 193 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 CD1CP29017 333 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 SLC5A2P31639 672 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 TMPRSS15P98073 1019 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 HHEXQ03014 270 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 TLE3Q04726 772 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 GTF2H3Q13889 308 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 C16orf72Q14CZ0 275 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 BROXQ5VW32 411 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 ZNF438Q7Z4V0 828 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 TRAPPC5Q8IUR0 188 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 SLC35F6Q8N357 371 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 SLC35B2Q8TB61 432 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 CCDC74BQ96LY2 380 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 SPATA13Q96N96 652 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 TTC25Q96NG3 672 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 TRABDQ9H4I3 376 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 STN1Q9H668 368 aaKnown RBP13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 CPNE5Q9HCH3 593 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 HACD3Q9P035 362 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 NFKBIL1Q9UBC1 381 aaPredicted RBP13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 TMPRSS11EQ9UL52 423 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 PKP3Q9Y446 797 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 KCTD3Q9Y597 815 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 ARL5AQ9Y689 179 aa13.45□□□□□ -0.26
VPS9D1-204ENST00000565023 KALRNO60229 2985 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 IGHV5-10-1A0A0J9YXX1 117 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 GLYATL1P3A0A0U1RQE8 302 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 A8MU76 341 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 CDRT15L2A8MXV6 281 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 ITGA2BP08514 1039 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 F3P13726 295 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 PBLDP30039 288 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 CSF2RBP32927 897 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 CA5AP35218 305 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 HMGCLP35914 325 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 ZFP36L1Q07352 338 aaKnown RBP13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 EIF3IQ13347 325 aaKnown RBP13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 PDPK2PQ6A1A2 396 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 ZNF574Q6ZN55 896 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 ARHGEF18Q6ZSZ5 1173 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 SLC9B2Q86UD5 537 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 SLITRK4Q8IW52 837 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 SFRP1Q8N474 314 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 FAM71DQ8N9W8 422 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 NAT14Q8WUY8 206 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 USP7Q93009 1102 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 PLEKHG4BQ96PX9 1271 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 CMKLR1Q99788 373 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 FRMD8P1Q9BZ68 369 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 IL26Q9NPH9 171 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 AKAP7Q9P0M2 348 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 IL17CQ9P0M4 197 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 FAM8A1Q9UBU6 413 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 KLHL3Q9UH77 587 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 PTPRQQ9UMZ3 2332 aa13.44□□□□□ -0.26
VPS9D1-204ENST00000565023 PRAMEF33A0A0G2JMD5 474 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 OR2AG2A6NM03 316 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 KMOO15229 486 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 PRAMEF10O60809 474 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 CCL4P13236 92 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 SLC2A4P14672 509 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 ZNF7P17097 686 aaPredicted RBP13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 MSNP26038 577 aaKnown RBP13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 RPL10P27635 214 aaKnown RBP13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 AKT1P31749 480 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 GPR3P46089 330 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 FASLGP48023 281 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 DRG2P55039 364 aaKnown RBP13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 CFHR1Q03591 330 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 TMEM115Q12893 351 aaPredicted RBP13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 NR1D2Q14995 579 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 SIX1Q15475 284 aaPredicted RBP13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 TGIF1Q15583 401 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 ARHGAP40Q5TG30 622 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 IYDQ6PHW0 289 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 IGF2-ASQ6U949 168 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 MICALCLQ6ZW33 695 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 DET1Q7L5Y6 550 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 TRIM48Q8IWZ4 208 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 OR4K2Q8NGD2 314 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 OR10G6Q8NH81 332 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 ATG4AQ8WYN0 398 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 NCSTNQ92542 709 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 TBL1YQ9BQ87 522 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 TBC1D10AQ9BXI6 508 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 ZNF106Q9H2Y7 1883 aaKnown RBP13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 PRORYQ9H606 182 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 KCND1Q9NSA2 647 aa13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 SCHIP1Q9P0W5 487 aaPredicted RBP13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 FKBPLQ9UIM3 349 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms