RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 TBC1D3IA0A087WXS9 549 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 TBC1D3EA0A087X179 549 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 TBC1D3KA0A087X1G2 549 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 FAM95CA0A1B0GW59 222 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 HMX2A2RU54 273 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 TBC1D3FA6NER0 549 aaPredicted RBP10.98□□□□□ -0.65
SF3B3-205ENST00000564899 LRRC72A6NJI9 287 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 AGAP14A8MT82 685 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 FADS2P1A8MWK0 482 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 FOXO6A8MYZ6 492 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 PATE3B3GLJ2 98 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 TBC1D3LB9A6J9 549 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 IGLV3-19P01714 112 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 MT-ND3P03897 115 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 TBC1D3HP0C7X1 549 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 ACRV1P26436 265 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 ACSL1P33121 698 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 CA5AP35218 305 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 PTGER3P43115 390 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 SERPINB8P50452 374 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 MAGOHP61326 146 aaKnown RBP10.98□□□□□ -0.65
SF3B3-205ENST00000564899 PPP2CBP62714 309 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 PPP2CAP67775 309 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 DNAJC3Q13217 504 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 TMEM259Q4ZIN3 620 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 TBC1D3GQ6DHY5 549 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 RAET1GQ6H3X3 334 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 TBC1D3CQ6IPX1 549 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 NEK5Q6P3R8 708 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 TRABD2AQ86V40 505 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 SRRM1Q8IYB3 904 aaKnown RBP10.98□□□□□ -0.65
SF3B3-205ENST00000564899 TBC1D3Q8IZP1 549 aaPredicted RBP10.98□□□□□ -0.65
SF3B3-205ENST00000564899 RBFAQ8N0V3 343 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 OR2T34Q8NGX1 318 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 ELMO2Q96JJ3 720 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 NDNQ99608 321 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 COPS8Q99627 209 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 GPR22Q99680 433 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 SCNM1Q9BWG6 230 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 CCDC68Q9H2F9 335 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 SGK2Q9HBY8 427 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 SMOXQ9NWM0 555 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 SENP1Q9P0U3 644 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 SLC39A10Q9ULF5 831 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 CORO1CQ9ULV4 474 aaPredicted RBP10.98□□□□□ -0.65
SF3B3-205ENST00000564899 CYP8B1Q9UNU6 501 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 ZFR2Q9UPR6 939 aaKnown RBP10.98□□□□□ -0.65
SF3B3-205ENST00000564899 CRYL1Q9Y2S2 319 aa10.98□□□□□ -0.65
SF3B3-205ENST00000564899 MTO1Q9Y2Z2 717 aaKnown RBP10.98□□□□□ -0.65
SF3B3-205ENST00000564899 ASH1LQ9NR48 2969 aaKnown RBP10.98□□□□□ -0.65
SF3B3-205ENST00000564899 SCN8AQ9UQD0 1980 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 GON4LQ3T8J9 2241 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 A0A1W2PPM1 405 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 K7ESM1 405 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 TPP1O14773 563 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 OR1I1O60431 355 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 FOXD2O60548 495 aaPredicted RBP10.97□□□□□ -0.65
SF3B3-205ENST00000564899 ZNF217O75362 1048 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 SEMA4FO95754 770 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 PCCBP05166 539 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 ZNF7P17097 686 aaPredicted RBP10.97□□□□□ -0.65
SF3B3-205ENST00000564899 SAT1P21673 171 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 OXTRP30559 389 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 FMO4P31512 558 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 GPR1P46091 355 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 POLD2P49005 469 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 SLC12A2P55011 1212 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 DPTQ07507 201 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 SGCGQ13326 291 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 ITIH4Q14624 930 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 USP10Q14694 798 aaKnown RBP10.97□□□□□ -0.65
SF3B3-205ENST00000564899 AGERQ15109 404 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 MAP7D1Q3KQU3 841 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 RBM20Q5T481 1227 aaKnown RBP10.97□□□□□ -0.65
SF3B3-205ENST00000564899 GPRC6AQ5T6X5 926 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 FAM45BPQ6NSW5 357 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 TIFABQ6ZNK6 161 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 MTERF4Q7Z6M4 381 aaKnown RBP10.97□□□□□ -0.65
SF3B3-205ENST00000564899 EXOC3L1Q86VI1 746 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 NLRP8Q86W28 1048 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 PHYKPLQ8IUZ5 450 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 SLC41A1Q8IVJ1 513 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 C4orf33Q8N1A6 199 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 CAMKK1Q8N5S9 505 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 ACVR1CQ8NER5 493 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 GDAP1Q8TB36 358 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 FAM45AQ8TCE6 357 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 KLK6Q92876 244 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 LOXL4Q96JB6 756 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 SERAC1Q96JX3 654 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 ZC3H10Q96K80 434 aaKnown RBP10.97□□□□□ -0.65
SF3B3-205ENST00000564899 VPS35Q96QK1 796 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 SMC6Q96SB8 1091 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 KLF6Q99612 283 aaPredicted RBP10.97□□□□□ -0.65
SF3B3-205ENST00000564899 BOCQ9BWV1 1114 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 C1QTNF7Q9BXJ2 289 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 C1QTNF2Q9BXJ5 285 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 TPSD1Q9BZJ3 242 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 CLPBQ9H078 707 aa10.97□□□□□ -0.65
SF3B3-205ENST00000564899 SNX15Q9NRS6 342 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms