RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 HEY1Q9Y5J3 304 aa16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 SPO11Q9Y5K1 396 aa16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 NBASA2RRP1 2371 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 ZNF106Q9H2Y7 1883 aaKnown RBP16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 K7EM74 188 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 AURKAO14965 403 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 KMOO15229 486 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 VIPP01282 170 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 H2AFZP0C0S5 128 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 CASP14P31944 242 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 AP1B1Q10567 949 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 PCSK7Q16549 785 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 INSCQ1MX18 579 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 SLC9A4Q6AI14 798 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 H2AFVQ71UI9 128 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 NT5DC3Q86UY8 548 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 LRRTM4Q86VH4 590 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 AVL9Q8NBF6 648 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 GALNT6Q8NCL4 622 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 SPATA22Q8NHS9 363 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 ZNF830Q96NB3 372 aaPredicted RBP16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 OLFM3Q96PB7 478 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 ULBP3Q9BZM4 244 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 ZNF768Q9H5H4 540 aaKnown RBP16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 CROTQ9UKG9 612 aa16.53■□□□□ 0.24
HDGFL3-203ENST00000563404 LRRD1A4D1F6 860 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 CLEC18AA5D8T8 446 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 OR52A4PA6NMU1 304 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 PDZK1P1A8MUH7 402 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 GPR89AB7ZAQ6 455 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 MTA2O94776 668 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 MT-CYBP00156 380 aaPredicted RBP16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 GPR89BP0CG08 455 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 AMD1P17707 334 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 NR1D1P20393 614 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 RPL10P27635 214 aaKnown RBP16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 HNRNPH3P31942 346 aaKnown RBP16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 DLSTP36957 453 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 DRG2P55039 364 aaKnown RBP16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 MC1RQ01726 317 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 CDK18Q07002 472 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 UBAP2LQ14157 1087 aaKnown RBP16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 MESDQ14696 234 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 ASTE1Q2TB18 679 aaPredicted RBP16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 ZFYVE27Q5T4F4 411 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 PDPK2PQ6A1A2 396 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 ABRAXAS1Q6UWZ7 409 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 C6orf15Q6UXA7 325 aaPredicted RBP16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 CLEC18BQ6UXF7 455 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 C11orf96Q7Z7L8 435 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 TRIM48Q8IWZ4 208 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 CLEC18CQ8NCF0 446 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 ELMO2Q96JJ3 720 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 OR6C1Q96RD1 312 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 TIMM29Q9BSF4 260 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 GPR63Q9BZJ6 419 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 SLC25A51Q9H1U9 297 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 SLC40A1Q9NP59 571 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 ANKMY1Q9P2S6 941 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 WDR37Q9Y2I8 494 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 KCNMB2Q9Y691 235 aa16.52■□□□□ 0.24
HDGFL3-203ENST00000563404 LRRK2Q5S007 2527 aa16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 TOX3O15405 576 aaPredicted RBP16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 KIAA0754O94854 1291 aa16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 NOP2P46087 812 aaKnown RBP16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 CAPZBP47756 277 aa16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 PPP1CAP62136 330 aa16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 GPR18Q14330 331 aa16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 SLC18A3Q16572 532 aa16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 LACTB2Q53H82 288 aaPredicted RBP16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 PRSS42Q7Z5A4 293 aa16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 TMEM135Q86UB9 458 aa16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 CTNNBL1Q8WYA6 563 aaPredicted RBP16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 KLHL6Q8WZ60 621 aa16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 IQCDQ96DY2 449 aa16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 BPIFA1Q9NP55 256 aa16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 RAD18Q9NS91 495 aa16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 POT1Q9NUX5 634 aa16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 IFNKQ9P0W0 207 aa16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 TRIM10Q9UDY6 481 aa16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 TP53TG5Q9Y2B4 290 aa16.51■□□□□ 0.23
HDGFL3-203ENST00000563404 ZNF487B1APH4 448 aa16.5■□□□□ 0.23
HDGFL3-203ENST00000563404 APOL1O14791 398 aa16.5■□□□□ 0.23
HDGFL3-203ENST00000563404 VEGFDO43915 354 aa16.5■□□□□ 0.23
HDGFL3-203ENST00000563404 CDK14O94921 469 aa16.5■□□□□ 0.23
HDGFL3-203ENST00000563404 NDUFA10O95299 355 aa16.5■□□□□ 0.23
HDGFL3-203ENST00000563404 TIAF1O95411 115 aa16.5■□□□□ 0.23
HDGFL3-203ENST00000563404 FGF5P12034 268 aa16.5■□□□□ 0.23
HDGFL3-203ENST00000563404 CA5AP35218 305 aa16.5■□□□□ 0.23
HDGFL3-203ENST00000563404 ERV3-1Q14264 604 aa16.5■□□□□ 0.23
HDGFL3-203ENST00000563404 PDK1Q15118 436 aa16.5■□□□□ 0.23
HDGFL3-203ENST00000563404 NOMO1Q15155 1222 aa16.5■□□□□ 0.23
HDGFL3-203ENST00000563404 ATP13A5Q4VNC0 1218 aa16.5■□□□□ 0.23
HDGFL3-203ENST00000563404 AGAP9Q5VTM2 703 aa16.5■□□□□ 0.23
HDGFL3-203ENST00000563404 WASH2PQ6VEQ5 465 aa16.5■□□□□ 0.23
HDGFL3-203ENST00000563404 FAM92BQ6ZTR7 304 aa16.5■□□□□ 0.23
HDGFL3-203ENST00000563404 GLOD4Q9HC38 313 aa16.5■□□□□ 0.23
HDGFL3-203ENST00000563404 WASH6PQ9NQA3 447 aa16.5■□□□□ 0.23
HDGFL3-203ENST00000563404 UBP1Q9NZI7 540 aa16.5■□□□□ 0.23
HDGFL3-203ENST00000563404 PLAAQ9Y263 795 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms