RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 TRAPPC5Q8IUR0 188 aa16.49■□□□□ 0.23
CLK3-207ENST00000562389 PNPLA1Q8N8W4 532 aa16.49■□□□□ 0.23
CLK3-207ENST00000562389 RASGEF1AQ8N9B8 481 aa16.49■□□□□ 0.23
CLK3-207ENST00000562389 OR6C4Q8NGE1 309 aa16.49■□□□□ 0.23
CLK3-207ENST00000562389 IFI44Q8TCB0 444 aa16.49■□□□□ 0.23
CLK3-207ENST00000562389 ZDHHC1Q8WTX9 485 aa16.49■□□□□ 0.23
CLK3-207ENST00000562389 NAT6Q93015 286 aa16.49■□□□□ 0.23
CLK3-207ENST00000562389 SGSM3Q96HU1 749 aa16.49■□□□□ 0.23
CLK3-207ENST00000562389 ZNF514Q96K75 400 aaPredicted RBP16.49■□□□□ 0.23
CLK3-207ENST00000562389 SERPINB12Q96P63 405 aa16.49■□□□□ 0.23
CLK3-207ENST00000562389 KRT12Q99456 494 aa16.49■□□□□ 0.23
CLK3-207ENST00000562389 KIFC1Q9BW19 673 aa16.49■□□□□ 0.23
CLK3-207ENST00000562389 FAM96AQ9H5X1 160 aa16.49■□□□□ 0.23
CLK3-207ENST00000562389 CHRAC1Q9NRG0 131 aa16.49■□□□□ 0.23
CLK3-207ENST00000562389 TREX1Q9NSU2 369 aa16.49■□□□□ 0.23
CLK3-207ENST00000562389 GULP1Q9UBP9 304 aa16.49■□□□□ 0.23
CLK3-207ENST00000562389 PADI4Q9UM07 663 aa16.49■□□□□ 0.23
CLK3-207ENST00000562389 SOX13Q9UN79 622 aa16.49■□□□□ 0.23
CLK3-207ENST00000562389 IGLV3-16A0A075B6K0 115 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 CCDC162PA2VCL2 907 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 TTI1O43156 1089 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 AVILO75366 819 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 GOT2P00505 430 aaKnown RBP16.48■□□□□ 0.23
CLK3-207ENST00000562389 RALBP11234 206 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 ZNF7P17097 686 aaPredicted RBP16.48■□□□□ 0.23
CLK3-207ENST00000562389 MAGEA3P43357 314 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 CDKN1CP49918 316 aaPredicted RBP16.48■□□□□ 0.23
CLK3-207ENST00000562389 CTSCP53634 463 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 PRAMEP78395 509 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 B4GALNT1Q00973 533 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 FOXK2Q01167 660 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 HLTFQ14527 1009 aaKnown RBP eCLIP16.48■□□□□ 0.23
CLK3-207ENST00000562389 INSCQ1MX18 579 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 PLA2G4EQ3MJ16 856 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 C14orf28Q4W4Y0 310 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 IZUMO3Q5VZ72 239 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 MICALCLQ6ZW33 695 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 C11orf96Q7Z7L8 435 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 SERPINA9Q86WD7 417 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 C17orf82Q86X59 251 aaPredicted RBP16.48■□□□□ 0.23
CLK3-207ENST00000562389 NAGSQ8N159 534 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 HDAC10Q969S8 669 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 COPS8Q99627 209 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 TRIM51Q9BSJ1 452 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 ZDHHC3Q9NYG2 299 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 CDC23Q9UJX2 597 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 WASF3Q9UPY6 502 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 KCNK6Q9Y257 313 aa16.48■□□□□ 0.23
CLK3-207ENST00000562389 DNMT3AQ9Y6K1 912 aaPredicted RBP16.48■□□□□ 0.23
CLK3-207ENST00000562389 OR51F1A6NGY5 319 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 PRR19A6NJB7 356 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 OR2AG2A6NM03 316 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 CFAP99D6REC4 459 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 GOLGA8MH3BSY2 632 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 KCNJ13O60928 360 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 PRSS56P0CW18 603 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 E2F1Q01094 437 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 CKAP4Q07065 602 aaKnown RBP16.47■□□□□ 0.23
CLK3-207ENST00000562389 C2orf54Q08AI8 447 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 FOXC1Q12948 553 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 ITIH4Q14624 930 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 BCL7AQ4VC05 210 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 CCDC157Q569K6 752 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 TMEM220Q6QAJ8 160 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 TAS2R42Q7RTR8 314 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 EFL1Q7Z2Z2 1120 aaKnown RBP16.47■□□□□ 0.23
CLK3-207ENST00000562389 SFTPA2Q8IWL1 248 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 PIANPQ8IYJ0 282 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 MPP5Q8N3R9 675 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.47■□□□□ 0.23
CLK3-207ENST00000562389 DCUN1D1Q96GG9 259 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 KLC4Q9NSK0 619 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 SLC23A2Q9UGH3 650 aa16.47■□□□□ 0.23
CLK3-207ENST00000562389 CPED1A4D0V7 1026 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 A6NCN8 305 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 FAM187AA6NFU0 413 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 SDR42E2A6NKP2 422 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 SMAPO00193 183 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 URI1O94763 535 aaPredicted RBP16.46■□□□□ 0.23
CLK3-207ENST00000562389 ATP1B2P14415 290 aaPredicted RBP16.46■□□□□ 0.23
CLK3-207ENST00000562389 GLB1P16278 677 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 VCLP18206 1134 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 NMBRP28336 390 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 DMPKQ09013 629 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 MORF4L2Q15014 288 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 SMAD1Q15797 465 aaKnown RBP16.46■□□□□ 0.23
CLK3-207ENST00000562389 DBN1Q16643 649 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 PERM1Q5SV97 790 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 LYPLAL1Q5VWZ2 237 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 DHRS13Q6UX07 377 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 CHCHD4Q8N4Q1 142 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 OR4L1Q8NH43 312 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 MFSD3Q96ES6 412 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 CCDC97Q96F63 343 aaPredicted RBP16.46■□□□□ 0.23
CLK3-207ENST00000562389 LINC00615Q96LM1 132 aaPredicted RBP16.46■□□□□ 0.23
CLK3-207ENST00000562389 SAMD15Q9P1V8 674 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 TBC1D29Q9UFV1 150 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 SPTBN2O15020 2390 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 ASXL3Q9C0F0 2248 aa16.46■□□□□ 0.23
CLK3-207ENST00000562389 COL27A1Q8IZC6 1860 aaPredicted RBP16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms