RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 HLA-DPA1P20036 260 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 CCKBRP32239 447 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 ADRA1AP35348 466 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 TERF1P54274 439 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 DCDC1P59894 354 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 ZFP36L1Q07352 338 aaKnown RBP9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 TMEM115Q12893 351 aaPredicted RBP9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 GTF2H3Q13889 308 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 SEPT6Q14141 434 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 SOWAHCQ53LP3 525 aaPredicted RBP9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 GPRC6AQ5T6X5 926 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 IYDQ6PHW0 289 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 TMEM220Q6QAJ8 160 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 ARHGEF18Q6ZSZ5 1173 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 ZNF438Q7Z4V0 828 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 VASH2Q86V25 355 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 LRRTM4Q86VH4 590 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 FAM129CQ86XR2 697 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 ZNF547Q8IVP9 402 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 TRIM48Q8IWZ4 208 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 SYCE1Q8N0S2 351 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 SFRP1Q8N474 314 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 RASGEF1AQ8N9B8 481 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 OR4K2Q8NGD2 314 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 C1orf54Q8WWF1 131 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 LIN37Q96GY3 246 aaPredicted RBP9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 TTC25Q96NG3 672 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 CTRCQ99895 268 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 TBL1YQ9BQ87 522 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 FERMT1Q9BQL6 677 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 TMEM121Q9BTD3 319 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 PRORYQ9H606 182 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 LZTFL1Q9NQ48 299 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 RAD18Q9NS91 495 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 OCIAD1Q9NX40 245 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 PSMD13Q9UNM6 376 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 PKP3Q9Y446 797 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 PCDHGA8Q9Y5G5 932 aa9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 CFAP20Q9Y6A4 193 aaKnown RBP9.34□□□□□ -0.91
NSMCE1-203ENST00000562039 A6NCN8 305 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 CDRT15L2A8MXV6 281 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 GAPDHSO14556 408 aaPredicted RBP9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 KMOO15229 486 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 DXOO77932 396 aaKnown RBP9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 PRAMEF1O95521 474 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 ITGA2BP08514 1039 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 F3P13726 295 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 AKT1P31749 480 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 PTPN7P35236 360 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 HMGCLP35914 325 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 CDKN1CP49918 316 aaPredicted RBP9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 ERVPABLB-1P60509 514 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 CLN3Q13286 438 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 LRP8Q14114 963 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 SEL1L2Q5TEA6 688 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 KIAA1614Q5VZ46 1190 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 DUS1LQ6P1R4 473 aaKnown RBP9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 RANBP10Q6VN20 620 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 FAM83HQ6ZRV2 1179 aaPredicted RBP9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 ZNF398Q8TD17 642 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 SGF29Q96ES7 293 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 TRABDQ9H4I3 376 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 ASB8Q9H765 288 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 RMI1Q9H9A7 625 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 ZNF624Q9P2J8 865 aaPredicted RBP9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 CPNE7Q9UBL6 633 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 WDR37Q9Y2I8 494 aa9.33□□□□□ -0.92
NSMCE1-203ENST00000562039 C2orf81A6NN90 581 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 EFCAB7A8K855 629 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 MIF4GDA9UHW6 222 aaKnown RBP9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 C9orf172C9J069 976 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 TMX2-CTNND1H3BSU7 103 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 CHUKO15111 745 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 DUX1O43812 170 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 POP7O75817 140 aaKnown RBP9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 VIPP01282 170 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 IFNB1P01574 187 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 EPOP01588 193 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 POLBP06746 335 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 FGF3P11487 239 aaPredicted RBP9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 BRAFP15056 766 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 MSH3P20585 1137 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 LPOP22079 712 aaPredicted RBP9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 SLC19A1P41440 591 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 GPR3P46089 330 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 SEPHS1P49903 392 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 LIMK2P53671 638 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 GFERP55789 205 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 KLF1Q13351 362 aaPredicted RBP9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 PEX6Q13608 980 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 NFE2L1Q14494 772 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 POU6F1Q14863 301 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 CLCA4Q14CN2 919 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 CCDC38Q502W7 563 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 FNBP1LQ5T0N5 605 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 BROXQ5VW32 411 aa9.32□□□□□ -0.92
NSMCE1-203ENST00000562039 DENND5AQ6IQ26 1287 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms