RNA–Protein interactions for RNA: ENST00000560043.1

AC105339.3-201, humanhuman

BASIC

Gene AC105339.3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.3-201ENST00000560043 CD1CP29017 333 aa17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 HHEXQ03014 270 aa17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 OASLQ15646 514 aaKnown RBP17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 PLA2G4EQ3MJ16 856 aa17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 RAB11FIP2Q7L804 512 aa17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 TRAPPC5Q8IUR0 188 aa17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 ZNF547Q8IVP9 402 aa17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 SLITRK4Q8IW52 837 aa17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 FBXO39Q8N4B4 442 aa17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 AVL9Q8NBF6 648 aa17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 DDHD1Q8NEL9 900 aa17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 PRR11Q96HE9 360 aaPredicted RBP17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 SLC38A3Q99624 504 aa17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 DPYSL5Q9BPU6 564 aa17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 C19orf43Q9BQ61 176 aa17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 RDH14Q9HBH5 336 aa17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 PRDM8Q9NQV8 689 aa17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 SMOXQ9NWM0 555 aa17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 FKBPLQ9UIM3 349 aa17.06■□□□□ 0.32
AC105339.3-201ENST00000560043 FREM2Q5SZK8 3169 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 ASPMQ8IZT6 3477 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 IGHV1OR21-1A0A087WYE8 117 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 KCNJ13O60928 360 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 SRP72O76094 671 aaKnown RBP17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 TNFSF15O95150 251 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 PRAMEF1O95521 474 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 AP2A1O95782 977 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 IFNB1P01574 187 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 HADHAP40939 763 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 PCBP4P57723 403 aaKnown RBP17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 GPLD1P80108 840 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 SQSTM1Q13501 440 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 SNX1Q13596 522 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 PHF19Q5T6S3 580 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 GPRC6AQ5T6X5 926 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 TMPRSS9Q7Z410 1059 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 TAB3Q8N5C8 712 aaPredicted RBP17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 ZNF248Q8NDW4 579 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 MAIP1Q8WWC4 291 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 TMEM159Q96B96 161 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 ASB8Q9H765 288 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 AKAP7Q9P0M2 348 aaPredicted RBP17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 CPNE7Q9UBL6 633 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 LHX6Q9UPM6 363 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 DNAJC16Q9Y2G8 782 aa17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 ZFC3H1O60293 1989 aaKnown RBP17.05■□□□□ 0.32
AC105339.3-201ENST00000560043 PMS2P1A4D2B8 440 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 ERI2A8K979 691 aaKnown RBP17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 GPR39O43194 453 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 ITGA2BP08514 1039 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 TPH1P17752 444 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 MSH3P20585 1137 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 IDSP22304 550 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 AKT1P31749 480 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 CA5AP35218 305 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 FDFT1P37268 417 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 PPM1FP49593 454 aaPredicted RBP17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 ZNF140P52738 457 aaPredicted RBP17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 NFATC2Q13469 925 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 CCNG2Q16589 344 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 COL28A1Q2UY09 1125 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 NKAIN2Q5VXU1 208 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 TMEM220Q6QAJ8 160 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 LINC00523Q86TU6 105 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 RASGEF1AQ8N9B8 481 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 OR13C4Q8NGS5 318 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 OR10G6Q8NH81 332 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 AHCYL2Q96HN2 611 aaKnown RBP17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 NUDT22Q9BRQ3 303 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 TLR10Q9BXR5 811 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 SEMA6CQ9H3T2 930 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 LOXL2Q9Y4K0 774 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 DNMT3AQ9Y6K1 912 aaPredicted RBP17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 ZZEF1O43149 2961 aa17.04■□□□□ 0.32
AC105339.3-201ENST00000560043 PRR19A6NJB7 356 aa17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 PDZK1P1A8MUH7 402 aa17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 CDRT15L2A8MXV6 281 aa17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 LDB2O43679 373 aa17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 POP7O75817 140 aaKnown RBP17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 JMJD7P0C870 316 aa17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 XRCC1P18887 633 aaPredicted RBP17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 ABCG1P45844 678 aa17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 LMAN1P49257 510 aa17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 CTSCP53634 463 aa17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 TMPRSS15P98073 1019 aa17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 XIAPP98170 497 aa17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 CCDC173Q0VFZ6 552 aa17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 LONRF2Q1L5Z9 754 aa17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 AGAP9Q5VTM2 703 aa17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 ABRAXAS1Q6UWZ7 409 aa17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 WASH2PQ6VEQ5 465 aa17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 ZNF574Q6ZN55 896 aaPredicted RBP17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 C11orf96Q7Z7L8 435 aa17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 CLEC14AQ86T13 490 aa17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 AMZ2Q86W34 360 aa17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 ZNF761Q86XN6 746 aaPredicted RBP17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 CCDC89Q8N998 374 aa17.03■□□□□ 0.32
AC105339.3-201ENST00000560043 OR4D9Q8NGE8 314 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms