RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 CEP104O60308 925 aa13.37□□□□□ -0.27
ALPK3-202ENST00000558077 SRP72O76094 671 aaKnown RBP13.37□□□□□ -0.27
ALPK3-202ENST00000558077 SUN1O94901 812 aa13.37□□□□□ -0.27
ALPK3-202ENST00000558077 FGGP02679 453 aa13.37□□□□□ -0.27
ALPK3-202ENST00000558077 BRAFP15056 766 aa13.37□□□□□ -0.27
ALPK3-202ENST00000558077 RPL22P35268 128 aaKnown RBP13.37□□□□□ -0.27
ALPK3-202ENST00000558077 TNNT3P45378 269 aaPredicted RBP13.37□□□□□ -0.27
ALPK3-202ENST00000558077 KCNJ1P48048 391 aa13.37□□□□□ -0.27
ALPK3-202ENST00000558077 SQSTM1Q13501 440 aa13.37□□□□□ -0.27
ALPK3-202ENST00000558077 SEMA5AQ13591 1074 aa13.37□□□□□ -0.27
ALPK3-202ENST00000558077 KCTD19Q17RG1 926 aaPredicted RBP13.37□□□□□ -0.27
ALPK3-202ENST00000558077 LRRTM4Q86VH4 590 aa13.37□□□□□ -0.27
ALPK3-202ENST00000558077 RASGEF1CQ8N431 466 aa13.37□□□□□ -0.27
ALPK3-202ENST00000558077 PRELID2Q8N945 189 aa13.37□□□□□ -0.27
ALPK3-202ENST00000558077 GFM1Q96RP9 751 aaKnown RBP13.37□□□□□ -0.27
ALPK3-202ENST00000558077 TIMM29Q9BSF4 260 aa13.37□□□□□ -0.27
ALPK3-202ENST00000558077 POLR1BQ9H9Y6 1135 aa13.37□□□□□ -0.27
ALPK3-202ENST00000558077 SATB2Q9UPW6 733 aa13.37□□□□□ -0.27
ALPK3-202ENST00000558077 AK5Q9Y6K8 562 aa13.37□□□□□ -0.27
ALPK3-202ENST00000558077 PTPRQQ9UMZ3 2332 aa13.37□□□□□ -0.27
ALPK3-202ENST00000558077 AHCTF1Q8WYP5 2266 aa13.37□□□□□ -0.27
ALPK3-202ENST00000558077 ZFYVE26Q68DK2 2539 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 IGHV1OR21-1A0A087WYE8 117 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 MROH6A6NGR9 719 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 H7C0S8 307 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 PSMD3O43242 534 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 PRAMEF1O95521 474 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 CRTAMO95727 393 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 IFNB1P01574 187 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 F3P13726 295 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 CCKBRP32239 447 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 GPR3P46089 330 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 CDKN1CP49918 316 aaPredicted RBP13.36□□□□□ -0.27
ALPK3-202ENST00000558077 UBE2IP63279 158 aaKnown RBP13.36□□□□□ -0.27
ALPK3-202ENST00000558077 GABREP78334 506 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 TMPRSS15P98073 1019 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 ITGA9Q13797 1035 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 PLA2G4EQ3MJ16 856 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 LDLRAP1Q5SW96 308 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 IGF2-ASQ6U949 168 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 ABRAXAS1Q6UWZ7 409 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 OR52K1Q8NGK4 314 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 NAT14Q8WUY8 206 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 LIN37Q96GY3 246 aaPredicted RBP13.36□□□□□ -0.27
ALPK3-202ENST00000558077 DNAJC1Q96KC8 554 aaKnown RBP13.36□□□□□ -0.27
ALPK3-202ENST00000558077 FOXP3Q9BZS1 431 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 SARS2Q9NP81 518 aaKnown RBP13.36□□□□□ -0.27
ALPK3-202ENST00000558077 CASS4Q9NQ75 786 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 ZNF624Q9P2J8 865 aaPredicted RBP13.36□□□□□ -0.27
ALPK3-202ENST00000558077 ZKSCAN5Q9Y2L8 839 aa13.36□□□□□ -0.27
ALPK3-202ENST00000558077 ITPR1Q14643 2758 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 LAMA5O15230 3695 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 TRBV5-4A0A0C4DH59 114 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 PRAMEF33A0A0G2JMD5 474 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 ERI2A8K979 691 aaKnown RBP13.35□□□□□ -0.27
ALPK3-202ENST00000558077 RHPN2P1A8MT19 583 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 NRDCO43847 1150 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 SNX2O60749 519 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 PRSS56P0CW18 603 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 ALDH4A1P30038 563 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 CSF2RBP32927 897 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 FDFT1P37268 417 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 SLC19A1P41440 591 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 ARSDP51689 593 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 DMPKQ09013 629 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 NFATC2Q13469 925 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 TBC1D25Q3MII6 688 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 C3orf38Q5JPI3 329 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 NKAIN2Q5VXU1 208 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 TMEM220Q6QAJ8 160 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 WASH2PQ6VEQ5 465 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 FAM83HQ6ZRV2 1179 aaPredicted RBP13.35□□□□□ -0.27
ALPK3-202ENST00000558077 USP53Q70EK8 1073 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 ZNF761Q86XN6 746 aaPredicted RBP13.35□□□□□ -0.27
ALPK3-202ENST00000558077 SLC35F6Q8N357 371 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 SNIP1Q8TAD8 396 aaKnown RBP13.35□□□□□ -0.27
ALPK3-202ENST00000558077 GDAP1Q8TB36 358 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 CDKN2AIPNLQ96HQ2 116 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 MS4A14Q96JA4 679 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 SLC46A1Q96NT5 459 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 NUDT22Q9BRQ3 303 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 SEMA6CQ9H3T2 930 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 FAM96AQ9H5X1 160 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 ASB8Q9H765 288 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 SYNDIG1Q9H7V2 258 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 RDH14Q9HBH5 336 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 WASH6PQ9NQA3 447 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 NLE1Q9NVX2 485 aaPredicted RBP13.35□□□□□ -0.27
ALPK3-202ENST00000558077 TTC7AQ9ULT0 858 aaPredicted RBP13.35□□□□□ -0.27
ALPK3-202ENST00000558077 DNAJC16Q9Y2G8 782 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 WDR37Q9Y2I8 494 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 JRKLQ9Y4A0 524 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 PCDHGA8Q9Y5G5 932 aa13.35□□□□□ -0.27
ALPK3-202ENST00000558077 IGLV3-16A0A075B6K0 115 aa13.34□□□□□ -0.27
ALPK3-202ENST00000558077 A0A087WV48 116 aa13.34□□□□□ -0.27
ALPK3-202ENST00000558077 CCDC187A0A096LP49 1063 aa13.34□□□□□ -0.27
ALPK3-202ENST00000558077 KIR2DS5A0A0G2JLQ3 304 aa13.34□□□□□ -0.27
ALPK3-202ENST00000558077 A0A0G2JNG1 304 aa13.34□□□□□ -0.27
ALPK3-202ENST00000558077 USP27XA6NNY8 438 aa13.34□□□□□ -0.27
ALPK3-202ENST00000558077 CDRT15L2A8MXV6 281 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms