RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 IFT88Q13099 833 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 TSNQ15631 228 aaKnown RBP20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 SMAD2Q15796 467 aaKnown RBP20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 AGBL4Q5VU57 503 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 ANKS4BQ8N8V4 417 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 ULK4Q96C45 1275 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 RMDN2Q96LZ7 410 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 SORT1Q99523 831 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 ZSCAN5AQ9BUG6 496 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 DERL2Q9GZP9 239 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 DHRS7Q9Y394 339 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 FADS3Q9Y5Q0 445 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 IGLV3-16A0A075B6K0 115 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 A8MT66 165 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 INPP4BO15327 924 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 HOXB2P14652 356 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 GRK2P25098 689 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 TAS2R38P59533 333 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 IL2P60568 153 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 ABCE1P61221 599 aaKnown RBP20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 ITIH4Q14624 930 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 MACC1Q6ZN28 852 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 HDDC3Q8N4P3 179 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 DNASE1L2Q92874 299 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 GABRG3Q99928 467 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 C8orf33Q9H7E9 229 aaPredicted RBP20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 A0A0G2JND7 137 aa20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 A0A1W2PQF6 199 aa20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 SHISA7A6NL88 538 aa20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 PSMD11O00231 422 aa20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 BTN3A1O00481 513 aa20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 NPC1O15118 1278 aa20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 LZTS3O60299 673 aaPredicted RBP20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 RNASEH2AO75792 299 aaKnown RBP20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 CD9P21926 228 aa20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 ATP5F1P24539 256 aaPredicted RBP20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 RPS14P62263 151 aaKnown RBP20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 TFF2Q03403 129 aa20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 SDE2Q6IQ49 451 aa20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 RPS27LQ71UM5 84 aaKnown RBP20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 CRLF3Q8IUI8 442 aa20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 NKAPQ8N5F7 415 aaKnown RBP20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 CCNYL1Q8N7R7 359 aa20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 AGR3Q8TD06 166 aa20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 TRIM55Q9BYV6 548 aa20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 SMOXQ9NWM0 555 aa20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 DNAJC16Q9Y2G8 782 aa20.16■□□□□ 0.82
SNRPA1-205ENST00000558036 RGSL1A5PLK6 1076 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 UBXN8O00124 270 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 CHRNGP07510 517 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 TROVE2P10155 538 aaKnown RBP eCLIP20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 DRD1P21728 446 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 STARD3Q14849 445 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 PIWIL4Q7Z3Z4 852 aaKnown RBP20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 SREK1Q8WXA9 508 aaKnown RBP20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 NUS1Q96E22 293 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 TMEM237Q96Q45 408 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 SHCBP1LQ9BZQ2 653 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 RAD18Q9NS91 495 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 KLHL14Q9P2G3 628 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 NFKBIL1Q9UBC1 381 aaPredicted RBP20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 ARL2BPQ9Y2Y0 163 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 PLXNB3Q9ULL4 1909 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 SOD1P00441 154 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 HNRNPH2P55795 449 aaKnown RBP20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 TMEM52BQ4KMG9 183 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 ZNF776Q68DI1 518 aaPredicted RBP20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 PTCRAQ6ISU1 281 aaPredicted RBP20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 UGT3A1Q6NUS8 523 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 TRIM67Q6ZTA4 783 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 TRIM74Q86UV6 250 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 BEND7Q8N7W2 519 aaPredicted RBP20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 OR2T3Q8NH03 318 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 CXorf40AQ8TE69 158 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 C10orf82Q8WW14 230 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 ATOH8Q96SQ7 321 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 CDH19Q9H159 772 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 PNPOQ9NVS9 261 aa20.15■□□□□ 0.82
SNRPA1-205ENST00000558036 ADH1BP00325 375 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 ATP1B2P14415 290 aaPredicted RBP20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 IL9P15248 144 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 C5AR1P21730 350 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 FBXO48Q5FWF7 155 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 C6orf89Q6UWU4 347 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 NRSN1Q8IZ57 195 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 DEFB123Q8N688 67 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 RPLP0P6Q8NHW5 317 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 GANCQ8TET4 914 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 BTN2A2Q8WVV5 523 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 INPP5DQ92835 1189 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 GLYATL1Q969I3 302 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 KIAA1191Q96A73 305 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 DCUN1D1Q96GG9 259 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 TFB2MQ9H5Q4 396 aaKnown RBP20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 KCNK13Q9HB14 408 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 NCKIPSDQ9NZQ3 722 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 MYO10Q9HD67 2058 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 PLXNA2O75051 1894 aa20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 NCF1BA6NI72 391 aaPredicted RBP20.14■□□□□ 0.81
SNRPA1-205ENST00000558036 OR2AG2A6NM03 316 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms