RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 C9P02748 559 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 ANKRD34CP0C6C1 535 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 AMD1P17707 334 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 COMTP21964 271 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 PTPN3P26045 913 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 CDKN2BP42772 138 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 PRKD1Q15139 912 aaPredicted RBP15.65■□□□□ 0.1
TUBB3-213ENST00000557262 SKOR2Q2VWA4 1001 aaPredicted RBP15.65■□□□□ 0.1
TUBB3-213ENST00000557262 ATG14Q6ZNE5 492 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 TIPARPQ7Z3E1 657 aaKnown RBP15.65■□□□□ 0.1
TUBB3-213ENST00000557262 TRIM48Q8IWZ4 208 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 TFB1MQ8WVM0 346 aaKnown RBP15.65■□□□□ 0.1
TUBB3-213ENST00000557262 KIAA1143Q96AT1 154 aaPredicted RBP15.65■□□□□ 0.1
TUBB3-213ENST00000557262 CATSPER2Q96P56 530 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 VPS35Q96QK1 796 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 TIMM29Q9BSF4 260 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 GPN2Q9H9Y4 310 aaPredicted RBP15.65■□□□□ 0.1
TUBB3-213ENST00000557262 BPIFA1Q9NP55 256 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 UBP1Q9NZI7 540 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 OGFRQ9NZT2 677 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 SAE1Q9UBE0 346 aaPredicted RBP15.65■□□□□ 0.1
TUBB3-213ENST00000557262 IL17BQ9UHF5 180 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 FAM153AQ9UHL3 310 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 TMPRSS11EQ9UL52 423 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 DNAJC16Q9Y2G8 782 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 HYOU1Q9Y4L1 999 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 TMEM184BQ9Y519 407 aaPredicted RBP15.65■□□□□ 0.1
TUBB3-213ENST00000557262 SPO11Q9Y5K1 396 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 SLC30A1Q9Y6M5 507 aa15.65■□□□□ 0.1
TUBB3-213ENST00000557262 LOC101059948A0A1B0GTJ6 334 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 LOC285095A0A1B0GVY8 99 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 PRR19A6NJB7 356 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 PDZK1P1A8MUH7 402 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 TOX3O15405 576 aaPredicted RBP15.64■□□□□ 0.09
TUBB3-213ENST00000557262 SPOPO43791 374 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 CST8O60676 142 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 MTX2O75431 263 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 STK17BO94768 372 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 UBXN7O94888 489 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 EPOP01588 193 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 IDSP22304 550 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 CD68P34810 354 aaPredicted RBP15.64■□□□□ 0.09
TUBB3-213ENST00000557262 HMGCLP35914 325 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 NOP2P46087 812 aaKnown RBP15.64■□□□□ 0.09
TUBB3-213ENST00000557262 CCR10P46092 362 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 NFKB2Q00653 900 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 ABHD18Q0P651 414 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 TMEM115Q12893 351 aaPredicted RBP15.64■□□□□ 0.09
TUBB3-213ENST00000557262 TAZQ16635 292 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 PLA2G4EQ3MJ16 856 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 WASH2PQ6VEQ5 465 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 ZNF547Q8IVP9 402 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 DTX3LQ8TDB6 740 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 BRSK1Q8TDC3 778 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 C9orf72Q96LT7 481 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 TRABDQ9H4I3 376 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 WASH6PQ9NQA3 447 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 MN1Q10571 1320 aaPredicted RBP15.64■□□□□ 0.09
TUBB3-213ENST00000557262 SPTA1P02549 2419 aa15.64■□□□□ 0.09
TUBB3-213ENST00000557262 NKX2-8O15522 239 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 MTSS1O43312 755 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 KCNJ13O60928 360 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 TYRP1P17643 537 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 VCLP18206 1134 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 RPL10P27635 214 aaKnown RBP15.63■□□□□ 0.09
TUBB3-213ENST00000557262 CSRP3P50461 194 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 GFERP55789 205 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 WNT3AP56704 352 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 WASHC5Q12768 1159 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 SEPT7Q16181 437 aaKnown RBP15.63■□□□□ 0.09
TUBB3-213ENST00000557262 ATP13A5Q4VNC0 1218 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 KHDC1Q4VXA5 237 aaKnown RBP15.63■□□□□ 0.09
TUBB3-213ENST00000557262 AGAP9Q5VTM2 703 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 ZDHHC20Q5W0Z9 365 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 KDELC1Q6UW63 502 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 PID1Q7Z2X4 250 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 RBM12BQ8IXT5 1001 aaKnown RBP15.63■□□□□ 0.09
TUBB3-213ENST00000557262 GDAP1Q8TB36 358 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 P3H4Q92791 437 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 TTC25Q96NG3 672 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 SLC40A1Q9NP59 571 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 IL26Q9NPH9 171 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 POT1Q9NUX5 634 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.63■□□□□ 0.09
TUBB3-213ENST00000557262 ALG6Q9Y672 507 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 MYO18BQ8IUG5 2567 aa15.63■□□□□ 0.09
TUBB3-213ENST00000557262 TLN1Q9Y490 2541 aaKnown RBP15.62■□□□□ 0.09
TUBB3-213ENST00000557262 TERTO14746 1132 aaKnown RBP15.62■□□□□ 0.09
TUBB3-213ENST00000557262 PSTPIP1O43586 416 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 ZRANB2O95218 330 aaKnown RBP eCLIP15.62■□□□□ 0.09
TUBB3-213ENST00000557262 DLGAP3O95886 979 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 BRAFP15056 766 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 PECAM1P16284 738 aaPredicted RBP15.62■□□□□ 0.09
TUBB3-213ENST00000557262 NFKB1P19838 968 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 TNNT3P45378 269 aaPredicted RBP15.62■□□□□ 0.09
TUBB3-213ENST00000557262 HADHBP55084 474 aaKnown RBP15.62■□□□□ 0.09
TUBB3-213ENST00000557262 POLE2P56282 527 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 FOXM1Q08050 763 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 GTF2H3Q13889 308 aa15.62■□□□□ 0.09
TUBB3-213ENST00000557262 MAP7Q14244 749 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms