RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 TNFRSF10BO14763 440 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 SEC14L2O76054 403 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 OR4F21O95013 312 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 PRR35P0CG20 571 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 ZNF12P17014 697 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 NFKBIAP25963 317 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 ACVRL1P37023 503 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 BCAP31P51572 246 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 DGKQP52824 942 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 EEFSECP57772 596 aaKnown RBP11.29□□□□□ -0.6
SRP54-213ENST00000556994 EMX2Q04743 252 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 CD300CQ08708 224 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 LAPTM5Q13571 262 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 GRB14Q14449 540 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 CYP2A13Q16696 494 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 MEP1AQ16819 746 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 MS4A13Q5J8X5 152 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 BROXQ5VW32 411 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 OVOS1Q6IE37 1185 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 PIWIL3Q7Z3Z3 882 aaKnown RBP11.29□□□□□ -0.6
SRP54-213ENST00000556994 BTLAQ7Z6A9 289 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 SPATA2LQ8IUW3 424 aaPredicted RBP11.29□□□□□ -0.6
SRP54-213ENST00000556994 RIMKLAQ8IXN7 391 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 UMODL1-AS1Q8N2C9 162 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 TERB1Q8NA31 727 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 PDPRQ8NCN5 879 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 GPR152Q8TDT2 470 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 SLC22A17Q8WUG5 538 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 KIAA1191Q96A73 305 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 PKMYT1Q99640 499 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 GPR21Q99679 349 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 ZYG11BQ9C0D3 744 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 SUN2Q9UH99 717 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 BLOC1S6Q9UL45 172 aa11.29□□□□□ -0.6
SRP54-213ENST00000556994 PAIP2BQ9ULR5 123 aaKnown RBP11.29□□□□□ -0.6
SRP54-213ENST00000556994 XYLBO75191 536 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 SERPINB7O75635 380 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 RPP40O75818 363 aaKnown RBP11.28□□□□□ -0.6
SRP54-213ENST00000556994 ALPLP05186 524 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 HTR1EP28566 365 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 HTR7P34969 479 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 RXRGP48443 463 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 ALDH3A2P51648 485 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 SUOXP51687 545 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 PLA2G16P53816 162 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 TMBIM6P55061 237 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 PHEXP78562 749 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 DDR2Q16832 855 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 C6orf136Q5SQH8 315 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 RAP1GAP2Q684P5 730 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 LRRC49Q8IUZ0 686 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 RNF168Q8IYW5 571 aaPredicted RBP11.28□□□□□ -0.6
SRP54-213ENST00000556994 OR52B6Q8NGF0 335 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 FUBP1Q96AE4 644 aaKnown RBP11.28□□□□□ -0.6
SRP54-213ENST00000556994 TUBA1CQ9BQE3 449 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 NEURL2Q9BR09 285 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 LRRC3Q9BY71 257 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 YTHDF1Q9BYJ9 559 aaKnown RBP11.28□□□□□ -0.6
SRP54-213ENST00000556994 TOR3AQ9H497 397 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 CARS2Q9HA77 564 aaKnown RBP11.28□□□□□ -0.6
SRP54-213ENST00000556994 C8orf4Q9NR00 106 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 EXD2Q9NVH0 621 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 PCDHGA8Q9Y5G5 932 aa11.28□□□□□ -0.6
SRP54-213ENST00000556994 H0YAE9 185 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 HAS3O00219 553 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 AXIN1O15169 862 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 ABCB7O75027 752 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 VPS4BO75351 444 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 SULT1C4O75897 302 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 ESRRBO95718 433 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 THRBP10828 461 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 CRHBPP24387 322 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 MTHFRP42898 656 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 STC1P52823 247 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 EFEMP1Q12805 493 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 DAG1Q14118 895 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 SPCS2Q15005 226 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 C18orf21Q32NC0 220 aaPredicted RBP11.27□□□□□ -0.6
SRP54-213ENST00000556994 XKR7Q5GH72 579 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 MSANTD2Q6P1R3 559 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 CD300LGQ6UXG3 332 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 Q6ZSR9 355 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 IGFN1Q86VF2 1251 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 PROSER1Q86XN7 944 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 MIB1Q86YT6 1006 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 SNX29P2Q8IUI4 249 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 HID1Q8IV36 788 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 FBXO30Q8TB52 745 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 ITFG1Q8TB96 612 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 ZC3H15Q8WU90 426 aaKnown RBP11.27□□□□□ -0.6
SRP54-213ENST00000556994 CDKN2AIPNLQ96HQ2 116 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 B3GALT6Q96L58 329 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 SERPINB11Q96P15 392 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 CYP2S1Q96SQ9 504 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 BEGAINQ9BUH8 593 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 TRIM62Q9BVG3 475 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 MUC13Q9H3R2 512 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 ZNF408Q9H9D4 720 aa11.27□□□□□ -0.6
SRP54-213ENST00000556994 ABI2Q9NYB9 513 aaPredicted RBP11.27□□□□□ -0.6
SRP54-213ENST00000556994 FLRT1Q9NZU1 646 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms