RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SFTPCP11686 197 aa22.26■■□□□ 1.15
ACTN1-220ENST00000556433 NFKB1P19838 968 aa22.26■■□□□ 1.15
ACTN1-220ENST00000556433 SLC19A1P41440 591 aa22.26■■□□□ 1.15
ACTN1-220ENST00000556433 ADCY2Q08462 1091 aa22.26■■□□□ 1.15
ACTN1-220ENST00000556433 NOMO1Q15155 1222 aa22.26■■□□□ 1.15
ACTN1-220ENST00000556433 SEPT7Q16181 437 aaKnown RBP22.26■■□□□ 1.15
ACTN1-220ENST00000556433 KHDC1Q4VXA5 237 aaKnown RBP22.26■■□□□ 1.15
ACTN1-220ENST00000556433 KDELC1Q6UW63 502 aa22.26■■□□□ 1.15
ACTN1-220ENST00000556433 CEACAM20Q6UY09 585 aa22.26■■□□□ 1.15
ACTN1-220ENST00000556433 TMEM26Q6ZUK4 368 aa22.26■■□□□ 1.15
ACTN1-220ENST00000556433 PID1Q7Z2X4 250 aa22.26■■□□□ 1.15
ACTN1-220ENST00000556433 ZC3H18Q86VM9 953 aaKnown RBP22.26■■□□□ 1.15
ACTN1-220ENST00000556433 GDAP1Q8TB36 358 aa22.26■■□□□ 1.15
ACTN1-220ENST00000556433 ZPBPQ9BS86 351 aa22.26■■□□□ 1.15
ACTN1-220ENST00000556433 TIMM29Q9BSF4 260 aa22.26■■□□□ 1.15
ACTN1-220ENST00000556433 GOLPH3Q9H4A6 298 aa22.26■■□□□ 1.15
ACTN1-220ENST00000556433 TRABDQ9H4I3 376 aa22.26■■□□□ 1.15
ACTN1-220ENST00000556433 UCK1Q9HA47 277 aa22.26■■□□□ 1.15
ACTN1-220ENST00000556433 KLHL8Q9P2G9 620 aaPredicted RBP22.26■■□□□ 1.15
ACTN1-220ENST00000556433 ZNF624Q9P2J8 865 aaPredicted RBP22.26■■□□□ 1.15
ACTN1-220ENST00000556433 HEMK1Q9Y5R4 338 aaPredicted RBP22.26■■□□□ 1.15
ACTN1-220ENST00000556433 ZRANB2O95218 330 aaKnown RBP eCLIP22.25■■□□□ 1.15
ACTN1-220ENST00000556433 EPOP01588 193 aa22.25■■□□□ 1.15
ACTN1-220ENST00000556433 TYRP1P17643 537 aa22.25■■□□□ 1.15
ACTN1-220ENST00000556433 ITGB6P18564 788 aa22.25■■□□□ 1.15
ACTN1-220ENST00000556433 HMGCLP35914 325 aa22.25■■□□□ 1.15
ACTN1-220ENST00000556433 TNNT3P45378 269 aaPredicted RBP22.25■■□□□ 1.15
ACTN1-220ENST00000556433 HADHBP55084 474 aaKnown RBP22.25■■□□□ 1.15
ACTN1-220ENST00000556433 TMEM115Q12893 351 aaPredicted RBP22.25■■□□□ 1.15
ACTN1-220ENST00000556433 ATP13A5Q4VNC0 1218 aa22.25■■□□□ 1.15
ACTN1-220ENST00000556433 TFDP3Q5H9I0 405 aa22.25■■□□□ 1.15
ACTN1-220ENST00000556433 ZNF547Q8IVP9 402 aa22.25■■□□□ 1.15
ACTN1-220ENST00000556433 RCOR2Q8IZ40 523 aa22.25■■□□□ 1.15
ACTN1-220ENST00000556433 NLGN4XQ8N0W4 816 aa22.25■■□□□ 1.15
ACTN1-220ENST00000556433 SLC25A41Q8N5S1 370 aa22.25■■□□□ 1.15
ACTN1-220ENST00000556433 NLGN4YQ8NFZ3 816 aaPredicted RBP22.25■■□□□ 1.15
ACTN1-220ENST00000556433 VPS35Q96QK1 796 aa22.25■■□□□ 1.15
ACTN1-220ENST00000556433 SPRY4Q9C004 299 aa22.25■■□□□ 1.15
ACTN1-220ENST00000556433 APMAPQ9HDC9 416 aa22.25■■□□□ 1.15
ACTN1-220ENST00000556433 F5H423 210 aaPredicted RBP22.24■■□□□ 1.15
ACTN1-220ENST00000556433 PYCARD-AS1I3L0S3 204 aa22.24■■□□□ 1.15
ACTN1-220ENST00000556433 AMD1P17707 334 aa22.24■■□□□ 1.15
ACTN1-220ENST00000556433 IDSP22304 550 aa22.24■■□□□ 1.15
ACTN1-220ENST00000556433 RPL10P27635 214 aaKnown RBP22.24■■□□□ 1.15
ACTN1-220ENST00000556433 CHRNA4P43681 627 aa22.24■■□□□ 1.15
ACTN1-220ENST00000556433 GTF2H3Q13889 308 aa22.24■■□□□ 1.15
ACTN1-220ENST00000556433 SIRPB2Q5JXA9 342 aa22.24■■□□□ 1.15
ACTN1-220ENST00000556433 ABRAXAS1Q6UWZ7 409 aa22.24■■□□□ 1.15
ACTN1-220ENST00000556433 PRICKLE2Q7Z3G6 844 aa22.24■■□□□ 1.15
ACTN1-220ENST00000556433 KATNAL2Q8IYT4 538 aa22.24■■□□□ 1.15
ACTN1-220ENST00000556433 HAUS1Q96CS2 278 aa22.24■■□□□ 1.15
ACTN1-220ENST00000556433 FCRL5Q96RD9 977 aa22.24■■□□□ 1.15
ACTN1-220ENST00000556433 IL26Q9NPH9 171 aa22.24■■□□□ 1.15
ACTN1-220ENST00000556433 STARD5Q9NSY2 213 aa22.24■■□□□ 1.15
ACTN1-220ENST00000556433 OGFRQ9NZT2 677 aa22.24■■□□□ 1.15
ACTN1-220ENST00000556433 TRIM10Q9UDY6 481 aa22.24■■□□□ 1.15
ACTN1-220ENST00000556433 SLC30A1Q9Y6M5 507 aa22.24■■□□□ 1.15
ACTN1-220ENST00000556433 hCG_1818297A0A087WSY0 165 aa22.23■■□□□ 1.15
ACTN1-220ENST00000556433 POLR1CO15160 346 aaPredicted RBP22.23■■□□□ 1.15
ACTN1-220ENST00000556433 UBXN7O94888 489 aa22.23■■□□□ 1.15
ACTN1-220ENST00000556433 BRAFP15056 766 aa22.23■■□□□ 1.15
ACTN1-220ENST00000556433 MAP4P27816 1152 aaKnown RBP22.23■■□□□ 1.15
ACTN1-220ENST00000556433 DRG2P55039 364 aaKnown RBP22.23■■□□□ 1.15
ACTN1-220ENST00000556433 GFERP55789 205 aa22.23■■□□□ 1.15
ACTN1-220ENST00000556433 CLCA4Q14CN2 919 aa22.23■■□□□ 1.15
ACTN1-220ENST00000556433 TRAPPC5Q8IUR0 188 aa22.23■■□□□ 1.15
ACTN1-220ENST00000556433 CCDC50Q8IVM0 306 aa22.23■■□□□ 1.15
ACTN1-220ENST00000556433 ZNF567Q8N184 647 aa22.23■■□□□ 1.15
ACTN1-220ENST00000556433 TTC30BQ8N4P2 665 aa22.23■■□□□ 1.15
ACTN1-220ENST00000556433 BRSK1Q8TDC3 778 aa22.23■■□□□ 1.15
ACTN1-220ENST00000556433 OXNAD1Q96HP4 312 aaPredicted RBP22.23■■□□□ 1.15
ACTN1-220ENST00000556433 MRGPRX2Q96LB1 330 aa22.23■■□□□ 1.15
ACTN1-220ENST00000556433 C9orf72Q96LT7 481 aa22.23■■□□□ 1.15
ACTN1-220ENST00000556433 TTC25Q96NG3 672 aa22.23■■□□□ 1.15
ACTN1-220ENST00000556433 VAT1Q99536 393 aa22.23■■□□□ 1.15
ACTN1-220ENST00000556433 HACD3Q9P035 362 aa22.23■■□□□ 1.15
ACTN1-220ENST00000556433 MN1Q10571 1320 aaPredicted RBP22.23■■□□□ 1.15
ACTN1-220ENST00000556433 PRR19A6NJB7 356 aa22.22■■□□□ 1.15
ACTN1-220ENST00000556433 CAPN5O15484 640 aaPredicted RBP22.22■■□□□ 1.15
ACTN1-220ENST00000556433 C9P02748 559 aa22.22■■□□□ 1.15
ACTN1-220ENST00000556433 VCLP18206 1134 aa22.22■■□□□ 1.15
ACTN1-220ENST00000556433 AGAP9Q5VTM2 703 aa22.22■■□□□ 1.15
ACTN1-220ENST00000556433 ZDHHC20Q5W0Z9 365 aa22.22■■□□□ 1.15
ACTN1-220ENST00000556433 BORAQ6PGQ7 559 aa22.22■■□□□ 1.15
ACTN1-220ENST00000556433 WASH2PQ6VEQ5 465 aa22.22■■□□□ 1.15
ACTN1-220ENST00000556433 TIPARPQ7Z3E1 657 aaKnown RBP22.22■■□□□ 1.15
ACTN1-220ENST00000556433 TC2NQ8N9U0 490 aa22.22■■□□□ 1.15
ACTN1-220ENST00000556433 IPMKQ8NFU5 416 aa22.22■■□□□ 1.15
ACTN1-220ENST00000556433 BLOC1S5Q8TDH9 187 aa22.22■■□□□ 1.15
ACTN1-220ENST00000556433 KIAA1143Q96AT1 154 aaPredicted RBP22.22■■□□□ 1.15
ACTN1-220ENST00000556433 CXorf40BQ96DE9 158 aa22.22■■□□□ 1.15
ACTN1-220ENST00000556433 TGM7Q96PF1 710 aa22.22■■□□□ 1.15
ACTN1-220ENST00000556433 GPN2Q9H9Y4 310 aaPredicted RBP22.22■■□□□ 1.15
ACTN1-220ENST00000556433 WASH6PQ9NQA3 447 aa22.22■■□□□ 1.15
ACTN1-220ENST00000556433 POT1Q9NUX5 634 aa22.22■■□□□ 1.15
ACTN1-220ENST00000556433 IL17CQ9P0M4 197 aa22.22■■□□□ 1.15
ACTN1-220ENST00000556433 TFR2Q9UP52 801 aa22.22■■□□□ 1.15
ACTN1-220ENST00000556433 PCDHA13Q9Y5I0 950 aa22.22■■□□□ 1.15
ACTN1-220ENST00000556433 OR52A4PA6NMU1 304 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 ZNF891A8MT65 544 aaPredicted RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms