RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 FAM133BQ5BKY9 247 aaKnown RBP3.08□□□□□ -1.92
SCFD1-213ENST00000554776 RARS2Q5T160 578 aaKnown RBP3.08□□□□□ -1.92
SCFD1-213ENST00000554776 C9orf57Q5W0N0 161 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 WDR73Q6P4I2 378 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 CREB3L2Q70SY1 520 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 CACNA2D4Q7Z3S7 1137 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 ARID3BQ8IVW6 561 aaPredicted RBP3.08□□□□□ -1.92
SCFD1-213ENST00000554776 MINDY1Q8N5J2 469 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 POMGNT2Q8NAT1 580 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 ZNF114Q8NC26 417 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 MCUQ8NE86 351 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 LMO3Q8TAP4 145 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 PGAP3Q96FM1 320 aaPredicted RBP3.08□□□□□ -1.92
SCFD1-213ENST00000554776 DGAT2Q96PD7 388 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 CMKLR1Q99788 373 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 MMTAG2Q9BU76 263 aaKnown RBP3.08□□□□□ -1.92
SCFD1-213ENST00000554776 FAM129AQ9BZQ8 928 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 OPA3Q9H6K4 179 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 SH3GLB2Q9NR46 395 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 OCIAD1Q9NX40 245 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 TSPYL4Q9UJ04 414 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 HACL1Q9UJ83 578 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 SNX9Q9Y5X1 595 aa3.08□□□□□ -1.92
SCFD1-213ENST00000554776 IGLV5-37A0A075B6J1 123 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 GPR75-ASB3A0A0A6YYF3 556 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 A0A1W2PRQ8 180 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 EIF4E1BA6NMX2 242 aaKnown RBP3.07□□□□□ -1.92
SCFD1-213ENST00000554776 CLGNO14967 610 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 SMAD9O15198 467 aaKnown RBP3.07□□□□□ -1.92
SCFD1-213ENST00000554776 SPRY1O43609 319 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-213ENST00000554776 GAGE7O76087 117 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 GGPS1O95749 300 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 GAGE12FP0CL80 117 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 GAGE12GP0CL81 117 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 GAGE12IP0CL82 117 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 CPT2P23786 658 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 MC5RP33032 325 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 CDH13P55290 713 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 CD81P60033 236 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 TUBA1BP68363 451 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 CSNK2A1P68400 391 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-213ENST00000554776 POU5F1Q01860 360 aaKnown RBP3.07□□□□□ -1.92
SCFD1-213ENST00000554776 CXCL9Q07325 125 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 GAGE1Q13065 139 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 GAGE4Q13068 117 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 MYBPHQ13203 477 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 SNTB1Q13884 538 aaKnown RBP3.07□□□□□ -1.92
SCFD1-213ENST00000554776 IL11RAQ14626 422 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 ALDH1L2Q3SY69 923 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 AMZ1Q400G9 498 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 XKR9Q5GH70 373 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 C9orf152Q5JTZ5 239 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 TMEM211Q6ICI0 200 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 TEX38Q6PEX7 206 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 SHQ1Q6PI26 577 aaKnown RBP3.07□□□□□ -1.92
SCFD1-213ENST00000554776 PRSS57Q6UWY2 283 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.07□□□□□ -1.925e-11■■■■■ 37.4
SCFD1-213ENST00000554776 C16orf82Q7Z2V1 217 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 ARMC9Q7Z3E5 817 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 DNAJB7Q7Z6W7 309 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-213ENST00000554776 VSIG1Q86XK7 387 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 CEP97Q8IW35 865 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 ZNF34Q8IZ26 560 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 PGBD5Q8N414 524 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 FBXO39Q8N4B4 442 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 PCDH20Q8N6Y1 951 aaKnown RBP3.07□□□□□ -1.92
SCFD1-213ENST00000554776 TDRD5Q8NAT2 981 aaKnown RBP3.07□□□□□ -1.92
SCFD1-213ENST00000554776 ACVR1CQ8NER5 493 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 CSNK2A3Q8NEV1 391 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 TRPC4APQ8TEL6 797 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 DUSP19Q8WTR2 217 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 PTPMT1Q8WUK0 201 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-213ENST00000554776 TEKT4Q8WW24 435 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 LPGAT1Q92604 370 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 ZNF622Q969S3 477 aaKnown RBP eCLIP3.07□□□□□ -1.923e-6■□□□□ 8.1
SCFD1-213ENST00000554776 RTP4Q96DX8 246 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 LINC00615Q96LM1 132 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-213ENST00000554776 HGH1Q9BTY7 390 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 C1QTNF1Q9BXJ1 281 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 PPIL3Q9H2H8 161 aaKnown RBP3.07□□□□□ -1.92
SCFD1-213ENST00000554776 ST6GALNAC4Q9H4F1 302 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 RAD21L1Q9H4I0 556 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 GAREM1Q9H706 876 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 STK39Q9UEW8 545 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 ANAPC2Q9UJX6 822 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 PADI3Q9ULW8 664 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 EXO1Q9UQ84 846 aaKnown RBP3.07□□□□□ -1.92
SCFD1-213ENST00000554776 PCDHGB1Q9Y5G3 927 aa3.07□□□□□ -1.92
SCFD1-213ENST00000554776 A0A1B0GUV1 79 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 KANSL1LA0AUZ9 987 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 TMEM189-UBE2V1I3L0A0 370 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 CCER2I3L3R5 266 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 J3QR06 171 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 DAB1O75553 588 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 DDNO94850 711 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-213ENST00000554776 SLCO2B1O94956 709 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 ZBTB11O95625 1053 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-213ENST00000554776 MYBL1P10243 752 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 PRLRP16471 622 aa3.06□□□□□ -1.92
SCFD1-213ENST00000554776 HRH2P25021 359 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms