RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 CCDC74BQ96LY2 380 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 SPATA13Q96N96 652 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 TTC25Q96NG3 672 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 FICDQ9BVA6 458 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 ZCCHC2Q9C0B9 1178 aaKnown RBP12.78□□□□□ -0.36
ACTN1-207ENST00000553290 ZMYND15Q9H091 742 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 OSGEPL1Q9H4B0 414 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 EPB41L1Q9H4G0 881 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 PRDM8Q9NQV8 689 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 TMPRSS11EQ9UL52 423 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 MGAQ8IWI9 3026 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 GLYATL1P3A0A0U1RQE8 302 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 EIF4E1BA6NMX2 242 aaKnown RBP12.77□□□□□ -0.37
ACTN1-207ENST00000553290 C2orf81A6NN90 581 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 STX7O15400 261 aaKnown RBP12.77□□□□□ -0.37
ACTN1-207ENST00000553290 KCNJ13O60928 360 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 MTX2O75431 263 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 AGTP01019 485 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 THRAP10827 490 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 VCLP18206 1134 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 XRCC1P18887 633 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-207ENST00000553290 CD82P27701 267 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 PSMB4P28070 264 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 CSF2RBP32927 897 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 CSTF2P33240 577 aaKnown RBP eCLIP12.77□□□□□ -0.37
ACTN1-207ENST00000553290 ADRA1AP35348 466 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 ETV5P41161 510 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 MAPK10P53779 464 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 CFHR1Q03591 330 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 VAC14Q08AM6 782 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 CLN3Q13286 438 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 NFATC2Q13469 925 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 TAF1AQ15573 450 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-207ENST00000553290 CHRNA6Q15825 494 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 LDLRAP1Q5SW96 308 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 AADACL2Q6P093 401 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 WDR74Q6RFH5 385 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-207ENST00000553290 ZNF761Q86XN6 746 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-207ENST00000553290 ZNF547Q8IVP9 402 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 RNF10Q8N5U6 811 aaKnown RBP12.77□□□□□ -0.37
ACTN1-207ENST00000553290 LSM14AQ8ND56 463 aaKnown RBP12.77□□□□□ -0.37
ACTN1-207ENST00000553290 AGBL5Q8NDL9 886 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 RCBTB1Q8NDN9 531 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 CCDC112Q8NEF3 446 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 SNRNP27Q8WVK2 155 aaKnown RBP12.77□□□□□ -0.37
ACTN1-207ENST00000553290 UBE2Q2Q8WVN8 375 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 USP7Q93009 1102 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 LRRC45Q96CN5 670 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 FAM118BQ9BPY3 351 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 GORASP1Q9BQQ3 440 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 DESI2Q9BSY9 194 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 CPNE5Q9HCH3 593 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 PDP2Q9P2J9 529 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 CPNE7Q9UBL6 633 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 TRIM10Q9UDY6 481 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 SLC23A2Q9UGH3 650 aa12.77□□□□□ -0.37
ACTN1-207ENST00000553290 PRAMEF33A0A0G2JMD5 474 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 C5orf60A6NFR6 353 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 PRR19A6NJB7 356 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 TK2O00142 265 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 AGRPO00253 132 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 PRAMEF10O60809 474 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 FTCDO95954 541 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 LIPCP11150 499 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 LPOP22079 712 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-207ENST00000553290 IDSP22304 550 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 UBE2IP63279 158 aaKnown RBP12.76□□□□□ -0.37
ACTN1-207ENST00000553290 PDE1BQ01064 536 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 RHDQ02161 417 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 PLA2G4EQ3MJ16 856 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 KHDC1Q4VXA5 237 aaKnown RBP12.76□□□□□ -0.37
ACTN1-207ENST00000553290 ARHGAP40Q5TG30 622 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 FAM151BQ6UXP7 276 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 WASH2PQ6VEQ5 465 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 TRAPPC5Q8IUR0 188 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 DDHD1Q8NEL9 900 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 CCDC110Q8TBZ0 833 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 BBC3Q96PG8 261 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-207ENST00000553290 TAAR9Q96RI9 348 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 CCNL2Q96S94 520 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-207ENST00000553290 TSGA10Q9BZW7 698 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 UCK1Q9HA47 277 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 WASH6PQ9NQA3 447 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 SMOXQ9NWM0 555 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 FEZ2Q9UHY8 353 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-207ENST00000553290 PACSIN2Q9UNF0 486 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-207ENST00000553290 DNAJC16Q9Y2G8 782 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 ARL5AQ9Y689 179 aa12.76□□□□□ -0.37
ACTN1-207ENST00000553290 DNMT3AQ9Y6K1 912 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-207ENST00000553290 A0A0U1RQJ8 604 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 LILRA5A6NI73 299 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 PDZK1P1A8MUH7 402 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 C9orf172C9J069 976 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 K7ENP7 123 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 ATXN7O15265 892 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-207ENST00000553290 DDX3YO15523 660 aaKnown RBP12.75□□□□□ -0.37
ACTN1-207ENST00000553290 BUD23O43709 281 aaKnown RBP12.75□□□□□ -0.37
ACTN1-207ENST00000553290 UGT1A9O60656 530 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 CRTAMO95727 393 aa12.75□□□□□ -0.37
ACTN1-207ENST00000553290 VIPP01282 170 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms