RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 STAG3L4Q8TBR4 150 aa19.48■□□□□ 0.71
SSH1-209ENST00000551165 PIP4K2CQ8TBX8 421 aa19.48■□□□□ 0.71
SSH1-209ENST00000551165 SLC7A6OSQ96CW6 309 aaPredicted RBP19.48■□□□□ 0.71
SSH1-209ENST00000551165 CCDC126Q96EE4 140 aa19.48■□□□□ 0.71
SSH1-209ENST00000551165 CNDP1Q96KN2 507 aa19.48■□□□□ 0.71
SSH1-209ENST00000551165 DKK3Q9UBP4 350 aa19.48■□□□□ 0.71
SSH1-209ENST00000551165 GNPTGQ9UJJ9 305 aa19.48■□□□□ 0.71
SSH1-209ENST00000551165 COMMD10Q9Y6G5 202 aa19.48■□□□□ 0.71
SSH1-209ENST00000551165 SUPT3HB4E1H0 165 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 F8W8V4 182 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 ARNTLO00327 626 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 NEMP1O14524 444 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 SMIM24O75264 130 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 SUPT3HO75486 399 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 TPBGLP0DKB5 382 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 CYP2A6P11509 494 aaPredicted RBP19.47■□□□□ 0.71
SSH1-209ENST00000551165 MMP12P39900 470 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 SKIV2L2P42285 1042 aaKnown RBP19.47■□□□□ 0.71
SSH1-209ENST00000551165 PTPN5P54829 565 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 ATP6V0D1P61421 351 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 ASPHQ12797 758 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 ESAMQ96AP7 390 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 LRIG1Q96JA1 1093 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 SIKE1Q9BRV8 207 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 ZDHHC3Q9NYG2 299 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 UTP6Q9NYH9 597 aaKnown RBP19.47■□□□□ 0.71
SSH1-209ENST00000551165 EDDM13A0A1B0GTR0 161 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 HERVK_113P63132 956 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 PDCD2Q16342 344 aaPredicted RBP19.47■□□□□ 0.71
SSH1-209ENST00000551165 KHDC1Q4VXA5 237 aaKnown RBP19.47■□□□□ 0.71
SSH1-209ENST00000551165 ACSBG2Q5FVE4 666 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 DPPA4Q7L190 304 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 SLC22A9Q8IVM8 553 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 L3HYPDHQ96EM0 354 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 RIOK2Q9BVS4 552 aaKnown RBP19.47■□□□□ 0.71
SSH1-209ENST00000551165 ERVK-6Q9BXR3 956 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 FAM83DQ9H4H8 585 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 PKD2L2Q9NZM6 624 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 COQ6Q9Y2Z9 468 aa19.47■□□□□ 0.71
SSH1-209ENST00000551165 CCDC189A1A4V9 331 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 FADS2P1A8MWK0 482 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 CAPN14A8MX76 684 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 GFAPP14136 432 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 ZNF30P17039 623 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 EPHA3P29320 983 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 PPARGP37231 505 aaPredicted RBP19.46■□□□□ 0.71
SSH1-209ENST00000551165 AGTR2P50052 363 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 NFKB2Q00653 900 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 GPRC6AQ5T6X5 926 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 LIPIQ6XZB0 460 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 MACC1Q6ZN28 852 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 MMAAQ8IVH4 418 aaKnown RBP19.46■□□□□ 0.71
SSH1-209ENST00000551165 PELI3Q8N2H9 469 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 KLHL29Q96CT2 875 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 PTCD3Q96EY7 689 aaKnown RBP19.46■□□□□ 0.71
SSH1-209ENST00000551165 TTC1Q99614 292 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 COPS8Q99627 209 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 CCDC106Q9BWC9 280 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 APOBEC2Q9Y235 224 aaKnown RBP19.46■□□□□ 0.71
SSH1-209ENST00000551165 ASB1Q9Y576 335 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 ATG2BQ96BY7 2078 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 A0A1B0GTL3 188 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 PRR5-ARHGAP8B1AHC4 643 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 E9PBE3 544 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 HDAC3O15379 428 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 KLHL41O60662 606 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 ARHGAP8P85298 464 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 ADGRE1Q14246 886 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 LYPLAL1Q5VWZ2 237 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 SEL1L3Q68CR1 1132 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 CUZD1Q86UP6 607 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 CACUL1Q86Y37 369 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 TRMT61BQ9BVS5 477 aaKnown RBP19.46■□□□□ 0.71
SSH1-209ENST00000551165 SAR1AQ9NR31 198 aa19.46■□□□□ 0.71
SSH1-209ENST00000551165 PRNPP04156 253 aa19.45■□□□□ 0.7
SSH1-209ENST00000551165 EPHX1P07099 455 aa19.45■□□□□ 0.7
SSH1-209ENST00000551165 SERPINA6P08185 405 aa19.45■□□□□ 0.7
SSH1-209ENST00000551165 CD1EP15812 388 aa19.45■□□□□ 0.7
SSH1-209ENST00000551165 MAGEA9P43362 315 aa19.45■□□□□ 0.7
SSH1-209ENST00000551165 CHRDL2Q6WN34 429 aa19.45■□□□□ 0.7
SSH1-209ENST00000551165 TECPR1Q7Z6L1 1165 aa19.45■□□□□ 0.7
SSH1-209ENST00000551165 OR8D1Q8WZ84 308 aa19.45■□□□□ 0.7
SSH1-209ENST00000551165 INPP5DQ92835 1189 aa19.45■□□□□ 0.7
SSH1-209ENST00000551165 MSLNLQ96KJ4 702 aa19.45■□□□□ 0.7
SSH1-209ENST00000551165 TXLNGQ9NUQ3 528 aa19.45■□□□□ 0.7
SSH1-209ENST00000551165 NSG1P42857 185 aa19.44■□□□□ 0.7
SSH1-209ENST00000551165 CPA2P48052 419 aa19.44■□□□□ 0.7
SSH1-209ENST00000551165 ELAVL3Q14576 367 aaKnown RBP19.44■□□□□ 0.7
SSH1-209ENST00000551165 C18orf21Q32NC0 220 aaPredicted RBP19.44■□□□□ 0.7
SSH1-209ENST00000551165 UGT3A1Q6NUS8 523 aa19.44■□□□□ 0.7
SSH1-209ENST00000551165 FBXO39Q8N4B4 442 aa19.44■□□□□ 0.7
SSH1-209ENST00000551165 TTYH1Q9H313 450 aaPredicted RBP19.44■□□□□ 0.7
SSH1-209ENST00000551165 PRSS16Q9NQE7 514 aa19.44■□□□□ 0.7
SSH1-209ENST00000551165 THAP10Q9P2Z0 257 aaPredicted RBP19.44■□□□□ 0.7
SSH1-209ENST00000551165 ADAMTS6Q9UKP5 1117 aa19.44■□□□□ 0.7
SSH1-209ENST00000551165 MTCH2Q9Y6C9 303 aa19.44■□□□□ 0.7
SSH1-209ENST00000551165 IGLV3-16A0A075B6K0 115 aa19.44■□□□□ 0.7
SSH1-209ENST00000551165 H0YHG0 523 aa19.44■□□□□ 0.7
SSH1-209ENST00000551165 ELFN1P0C7U0 828 aa19.44■□□□□ 0.7
SSH1-209ENST00000551165 EEF1DP29692 281 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms