RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 PRPF4O43172 522 aaKnown RBP eCLIP17.19■□□□□ 0.34
LETMD1-220ENST00000549686 GSTA1P08263 222 aa17.19■□□□□ 0.34
LETMD1-220ENST00000549686 MAT2AP31153 395 aaKnown RBP17.19■□□□□ 0.34
LETMD1-220ENST00000549686 CA5AP35218 305 aa17.19■□□□□ 0.34
LETMD1-220ENST00000549686 CDK3Q00526 305 aa17.19■□□□□ 0.34
LETMD1-220ENST00000549686 B4GALNT1Q00973 533 aa17.19■□□□□ 0.34
LETMD1-220ENST00000549686 TMEM115Q12893 351 aaPredicted RBP17.19■□□□□ 0.34
LETMD1-220ENST00000549686 PDAP1Q13442 181 aaKnown RBP17.19■□□□□ 0.34
LETMD1-220ENST00000549686 INPP5AQ14642 412 aa17.19■□□□□ 0.34
LETMD1-220ENST00000549686 INSCQ1MX18 579 aa17.19■□□□□ 0.34
LETMD1-220ENST00000549686 CTSL3PQ5NE16 218 aa17.19■□□□□ 0.34
LETMD1-220ENST00000549686 HEATR4Q86WZ0 1026 aa17.19■□□□□ 0.34
LETMD1-220ENST00000549686 PNPLA1Q8N8W4 532 aa17.19■□□□□ 0.34
LETMD1-220ENST00000549686 KLK6Q92876 244 aa17.19■□□□□ 0.34
LETMD1-220ENST00000549686 TSNARE1Q96NA8 513 aa17.19■□□□□ 0.34
LETMD1-220ENST00000549686 BOCQ9BWV1 1114 aa17.19■□□□□ 0.34
LETMD1-220ENST00000549686 C6orf106Q9H6K1 298 aaPredicted RBP17.19■□□□□ 0.34
LETMD1-220ENST00000549686 MBNL1Q9NR56 388 aaKnown RBP17.19■□□□□ 0.34
LETMD1-220ENST00000549686 DCDC2Q9UHG0 476 aa17.19■□□□□ 0.34
LETMD1-220ENST00000549686 ACOT9Q9Y305 439 aa17.19■□□□□ 0.34
LETMD1-220ENST00000549686 OAS3Q9Y6K5 1087 aaKnown RBP17.19■□□□□ 0.34
LETMD1-220ENST00000549686 CACNB4O00305 520 aaPredicted RBP17.18■□□□□ 0.34
LETMD1-220ENST00000549686 COPEO14579 308 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 KPNA5O15131 536 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 MAGEC1O60732 1142 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 FSBPO95073 299 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 FTH1P02794 183 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 IGHV4-34P06331 123 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 C2P06681 752 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 MYCLP1P12525 358 aaPredicted RBP17.18■□□□□ 0.34
LETMD1-220ENST00000549686 CHRM3P20309 590 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 NR1D1P20393 614 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 SAT1P21673 171 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 KELP23276 732 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 OAS2P29728 719 aaKnown RBP17.18■□□□□ 0.34
LETMD1-220ENST00000549686 CRHR1P34998 444 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 IGFALSP35858 605 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 KIAA1024LP59773 190 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 PPP2R2AP63151 447 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 PDE1CQ14123 709 aaPredicted RBP17.18■□□□□ 0.34
LETMD1-220ENST00000549686 TTLL9Q3SXZ7 439 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 BCL7AQ4VC05 210 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 CMC1Q7Z7K0 106 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 C1orf210Q8IVY1 113 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 KRT222Q8N1A0 295 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 C4orf33Q8N1A6 199 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 PELI3Q8N2H9 469 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 BANPQ8N9N5 519 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 PLA2G15Q8NCC3 412 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 ACVR1CQ8NER5 493 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 APOPT1Q96IL0 206 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 OLFM1Q99784 485 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 IQCGQ9H095 443 aaKnown RBP17.18■□□□□ 0.34
LETMD1-220ENST00000549686 VPS11Q9H270 941 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 CNOT10Q9H9A5 744 aaKnown RBP17.18■□□□□ 0.34
LETMD1-220ENST00000549686 CAB39LQ9H9S4 337 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 LATS2Q9NRM7 1088 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 SPATS2LQ9NUQ6 558 aaKnown RBP17.18■□□□□ 0.34
LETMD1-220ENST00000549686 PCMTD2Q9NV79 361 aa17.18■□□□□ 0.34
LETMD1-220ENST00000549686 TRMT6Q9UJA5 497 aaKnown RBP17.18■□□□□ 0.34
LETMD1-220ENST00000549686 KLHL33A6NCF5 533 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 RAD51BO15315 384 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 GLRA3O75311 464 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 CDK14O94921 469 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 PXNP49023 591 aaPredicted RBP17.17■□□□□ 0.34
LETMD1-220ENST00000549686 KPNA2P52292 529 aaKnown RBP17.17■□□□□ 0.34
LETMD1-220ENST00000549686 CDKN2DP55273 166 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 YPEL5P62699 121 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 TSNAXIP1Q2TAA8 658 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 TMEM31Q5JXX7 168 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 ADGRG6Q86SQ4 1221 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 TBC1D1Q86TI0 1168 aaPredicted RBP17.17■□□□□ 0.34
LETMD1-220ENST00000549686 WDR5BQ86VZ2 330 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 CEP97Q8IW35 865 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 CLDN19Q8N6F1 224 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 FAM76AQ8TAV0 307 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 RLN3Q8WXF3 142 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 INPP5DQ92835 1189 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 FOXJ1Q92949 421 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 BIRC7Q96CA5 298 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 APOOQ9BUR5 198 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 RMI1Q9H9A7 625 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 GPAMQ9HCL2 828 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 OGFRQ9NZT2 677 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 FBXO4Q9UKT5 387 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 GPR34Q9UPC5 381 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.17■□□□□ 0.34
LETMD1-220ENST00000549686 DHRS7Q9Y394 339 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 PRSS21Q9Y6M0 314 aa17.17■□□□□ 0.34
LETMD1-220ENST00000549686 A0A1W2PPC4 97 aa17.16■□□□□ 0.34
LETMD1-220ENST00000549686 CCDC189A1A4V9 331 aa17.16■□□□□ 0.34
LETMD1-220ENST00000549686 METTL12A8MUP2 240 aa17.16■□□□□ 0.34
LETMD1-220ENST00000549686 GOLGA8RI6L899 631 aa17.16■□□□□ 0.34
LETMD1-220ENST00000549686 EIF3FO00303 357 aaPredicted RBP17.16■□□□□ 0.34
LETMD1-220ENST00000549686 TM9SF1O15321 606 aa17.16■□□□□ 0.34
LETMD1-220ENST00000549686 PHGDHO43175 533 aaKnown RBP17.16■□□□□ 0.34
LETMD1-220ENST00000549686 TYROBPO43914 113 aa17.16■□□□□ 0.34
LETMD1-220ENST00000549686 NIPSNAP2O75323 286 aa17.16■□□□□ 0.34
LETMD1-220ENST00000549686 ZWINTO95229 277 aa17.16■□□□□ 0.34
LETMD1-220ENST00000549686 WISP3O95389 354 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms