RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 LHCGRP22888 699 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 SERPINB3P29508 390 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 AKT1P31749 480 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 MMP12P39900 470 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 MAGEA9P43362 315 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 IDH3AP50213 366 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 SATB1Q01826 763 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 CDC16Q13042 620 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 GRM2Q14416 872 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 COL19A1Q14993 1142 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 ACOX1Q15067 660 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 PTPRRQ15256 657 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 LRIT3Q3SXY7 679 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 TMEM52BQ4KMG9 183 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 ATP13A5Q4VNC0 1218 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 SETMARQ53H47 684 aaPredicted RBP13.29□□□□□ -0.28
PTCH1-215ENST00000547672 PLEKHS1Q5SXH7 462 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 ZNF678Q5SXM1 525 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 EPGNQ6UW88 154 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 PARM1Q6UWI2 310 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 NAPRTQ6XQN6 538 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 LIPIQ6XZB0 460 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 FRMD7Q6ZUT3 714 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 FRA10AC1Q70Z53 315 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 ERN2Q76MJ5 926 aaKnown RBP13.29□□□□□ -0.28
PTCH1-215ENST00000547672 MICALL1Q8N3F8 863 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 SIDT2Q8NBJ9 832 aaKnown RBP13.29□□□□□ -0.28
PTCH1-215ENST00000547672 EEF1AKMT1Q8WVE0 214 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 VOPP1Q96AW1 172 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 SKA1Q96BD8 255 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 KLHL29Q96CT2 875 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 ZNF514Q96K75 400 aaPredicted RBP13.29□□□□□ -0.28
PTCH1-215ENST00000547672 MSLNLQ96KJ4 702 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 ATOH8Q96SQ7 321 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 FAM129BQ96TA1 746 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 P2RY13Q9BPV8 354 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 C20orf27Q9GZN8 174 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 EPHX3Q9H6B9 360 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 COG4Q9H9E3 785 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 PNPOQ9NVS9 261 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 MARCOQ9UEW3 520 aaPredicted RBP13.29□□□□□ -0.28
PTCH1-215ENST00000547672 CD207Q9UJ71 328 aa13.29□□□□□ -0.28
PTCH1-215ENST00000547672 ZNF106Q9H2Y7 1883 aaKnown RBP13.29□□□□□ -0.28
PTCH1-215ENST00000547672 KIF26AQ9ULI4 1882 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-215ENST00000547672 OTOL1A6NHN0 477 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-215ENST00000547672 ANHXE9PGG2 379 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 FCHO1O14526 889 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 SLC16A5O15375 505 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 TSPAN6O43657 245 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 KLK8O60259 260 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 DIAPH2O60879 1101 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 VPS4BO75351 444 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 CHEK2O96017 543 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 EPHX1P07099 455 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 CTSLP07711 333 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 FGF4P08620 206 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 ENO2P09104 434 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-215ENST00000547672 ESRRAP11474 423 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-215ENST00000547672 CALB2P22676 271 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 PLOD1Q02809 727 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-215ENST00000547672 CREB5Q02930 508 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 ENPP2Q13822 863 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 PFKFB4Q16877 469 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 GPRC6AQ5T6X5 926 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 NEK10Q6ZWH5 1172 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 TECPR1Q7Z6L1 1165 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 CLYBLQ8N0X4 340 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 ARHGAP24Q8N264 748 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 PTGR2Q8N8N7 351 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-215ENST00000547672 DDHD1Q8NEL9 900 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 CXorf40AQ8TE69 158 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 BTN2A2Q8WVV5 523 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 FUBP1Q96AE4 644 aaKnown RBP13.28□□□□□ -0.28
PTCH1-215ENST00000547672 PTERQ96BW5 349 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 AP2M1Q96CW1 435 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 PHF21BQ96EK2 531 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 MSANTD3Q96H12 275 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 TMEM237Q96Q45 408 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 C1QTNF3Q9BXJ4 246 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 PLA2G2FQ9BZM2 168 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 RASSF4Q9H2L5 321 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 ZNF395Q9H8N7 513 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-215ENST00000547672 RDH14Q9HBH5 336 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.28□□□□□ -0.28
PTCH1-215ENST00000547672 GTSE1Q9NYZ3 720 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 CD274Q9NZQ7 290 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 LNPEPQ9UIQ6 1025 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 CDYLQ9Y232 598 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 MED16Q9Y2X0 877 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 MTCH2Q9Y6C9 303 aa13.28□□□□□ -0.28
PTCH1-215ENST00000547672 AP1G1O43747 822 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 LZTS3O60299 673 aaPredicted RBP13.27□□□□□ -0.29
PTCH1-215ENST00000547672 C8GP07360 202 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 MPC1LP0DKB6 136 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 ADRB3P13945 408 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 C5AR1P21730 350 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 GMPRP36959 345 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 PIK3CGP48736 1102 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 LIG3P49916 1009 aa13.27□□□□□ -0.29
PTCH1-215ENST00000547672 DPTQ07507 201 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms