RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 A0A1B0GVM2 712 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 MAGEB17A8MXT2 336 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 SLC33A1O00400 549 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-210ENST00000547654 EBAG9O00559 213 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 MPHOSPH10O00566 681 aaKnown RBP4.26□□□□□ -1.73
SCAF11-210ENST00000547654 RTN2O75298 545 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 SEC22BO75396 215 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 SIX3O95343 332 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-210ENST00000547654 HOXA7P31268 230 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-210ENST00000547654 PCGF2P35227 344 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 SUOXP51687 545 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 HSD17B7P56937 341 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 TAS2R40P59535 323 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 RPS13P62277 151 aaKnown RBP4.26□□□□□ -1.73
SCAF11-210ENST00000547654 MRPS34P82930 218 aaKnown RBP4.26□□□□□ -1.73
SCAF11-210ENST00000547654 GRSF1Q12849 480 aaKnown RBP eCLIP4.26□□□□□ -1.73
SCAF11-210ENST00000547654 ITGA7Q13683 1181 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 KPNB1Q14974 876 aaKnown RBP4.26□□□□□ -1.73
SCAF11-210ENST00000547654 CBWD6Q4V339 395 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 CBWD3Q5JTY5 395 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 RARS2Q5T160 578 aaKnown RBP4.26□□□□□ -1.73
SCAF11-210ENST00000547654 ZNF549Q6P9A3 640 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 MOXD1Q6UVY6 613 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 CEP57Q86XR8 500 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 RFX6Q8HWS3 928 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 UEVLDQ8IX04 471 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 PAQR4Q8N4S7 273 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-210ENST00000547654 AFAP1Q8N556 730 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 RBMXL3Q8N7X1 1067 aaKnown RBP4.26□□□□□ -1.73
SCAF11-210ENST00000547654 CFAP61Q8NHU2 1237 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 IP6K1Q92551 441 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 CELF1Q92879 486 aaKnown RBP4.26□□□□□ -1.73
SCAF11-210ENST00000547654 RRNAD1Q96FB5 475 aaKnown RBP4.26□□□□□ -1.73
SCAF11-210ENST00000547654 PPP1R13BQ96KQ4 1090 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 LINC00615Q96LM1 132 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-210ENST00000547654 RMDN2Q96LZ7 410 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 ZNF830Q96NB3 372 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-210ENST00000547654 ZNF558Q96NG5 402 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 INTS14Q96SY0 518 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 C1QTNF5Q9BXJ0 243 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 NUAK2Q9H093 628 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 C1orf21Q9H246 121 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 GOLPH3LQ9H4A5 285 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 DNAJC18Q9H819 358 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 ZBTB40Q9NUA8 1239 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 COPG2Q9UBF2 871 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 LEF1Q9UJU2 399 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-210ENST00000547654 BLOC1S6Q9UL45 172 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 CDH7Q9ULB5 785 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 MAFFQ9ULX9 164 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 KCNK7Q9Y2U2 307 aa4.26□□□□□ -1.73
SCAF11-210ENST00000547654 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-210ENST00000547654 A0A1W2PR77 199 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 LACTBL1A8MY62 500 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 KDM4EB2RXH2 506 aaPredicted RBP4.25□□□□□ -1.73
SCAF11-210ENST00000547654 AKR1B15C9JRZ8 316 aaPredicted RBP4.25□□□□□ -1.73
SCAF11-210ENST00000547654 NDC80O14777 642 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 CAPN9O14815 690 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 IFIT3O14879 490 aaKnown RBP4.25□□□□□ -1.73
SCAF11-210ENST00000547654 ASAP2O43150 1006 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 TXNL1O43396 289 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 PLRG1O43660 514 aaKnown RBP4.25□□□□□ -1.73
SCAF11-210ENST00000547654 ATP2C2O75185 946 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 DAB1O75553 588 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 GUCA1CO95843 209 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 OLFM2O95897 454 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 AGAP20933 346 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 IL10P22301 178 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 ACHEP22303 614 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 GPTP24298 496 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 PTPN3P26045 913 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 SOX2P48431 317 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 CLCNKBP51801 687 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 STX1BP61266 288 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 HYAL1Q12794 435 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 GRIK3Q13003 919 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 LASP1Q14847 261 aaKnown RBP4.25□□□□□ -1.73
SCAF11-210ENST00000547654 RRS1Q15050 365 aaKnown RBP4.25□□□□□ -1.73
SCAF11-210ENST00000547654 TAF7Q15545 349 aaPredicted RBP4.25□□□□□ -1.73
SCAF11-210ENST00000547654 PFKFB3Q16875 520 aaPredicted RBP4.25□□□□□ -1.73
SCAF11-210ENST00000547654 KRT24Q2M2I5 525 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 USP41Q3LFD5 358 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 CDONQ4KMG0 1287 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 SOWAHCQ53LP3 525 aaPredicted RBP4.25□□□□□ -1.73
SCAF11-210ENST00000547654 VWA5B1Q5TIE3 1220 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 TMEM211Q6ICI0 200 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 ETFRF1Q6IPR1 90 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 CES5AQ6NT32 575 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 WDR73Q6P4I2 378 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 ZNF474Q6S9Z5 364 aaPredicted RBP4.25□□□□□ -1.73
SCAF11-210ENST00000547654 ABRAXAS1Q6UWZ7 409 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 Q6ZTC4 211 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 HAUS6Q7Z4H7 955 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 DSG4Q86SJ6 1040 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 CCDC25Q86WR0 208 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 ADHFE1Q8IWW8 467 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 CADM3Q8N126 398 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 TMEM217Q8N7C4 229 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 FAM47BQ8NA70 645 aa4.25□□□□□ -1.73
SCAF11-210ENST00000547654 RBM15BQ8NDT2 890 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms