RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 PRR11Q96HE9 360 aaPredicted RBP22.94■■□□□ 1.26
CHFR-222ENST00000544093 ZNF514Q96K75 400 aaPredicted RBP22.94■■□□□ 1.26
CHFR-222ENST00000544093 OSGEPL1Q9H4B0 414 aa22.94■■□□□ 1.26
CHFR-222ENST00000544093 EPB41L1Q9H4G0 881 aa22.94■■□□□ 1.26
CHFR-222ENST00000544093 ARL5AQ9Y689 179 aa22.94■■□□□ 1.26
CHFR-222ENST00000544093 NBEAQ8NFP9 2946 aa22.94■■□□□ 1.26
CHFR-222ENST00000544093 IGHV1OR21-1A0A087WYE8 117 aa22.93■■□□□ 1.26
CHFR-222ENST00000544093 ERI2A8K979 691 aaKnown RBP22.93■■□□□ 1.26
CHFR-222ENST00000544093 CDRT15L2A8MXV6 281 aa22.93■■□□□ 1.26
CHFR-222ENST00000544093 HGSO14964 777 aaPredicted RBP22.93■■□□□ 1.26
CHFR-222ENST00000544093 SNX2O60749 519 aa22.93■■□□□ 1.26
CHFR-222ENST00000544093 MTX2O75431 263 aa22.93■■□□□ 1.26
CHFR-222ENST00000544093 TNFSF15O95150 251 aa22.93■■□□□ 1.26
CHFR-222ENST00000544093 PRAMEF1O95521 474 aa22.93■■□□□ 1.26
CHFR-222ENST00000544093 JMJD7P0C870 316 aa22.93■■□□□ 1.26
CHFR-222ENST00000544093 CD1CP29017 333 aa22.93■■□□□ 1.26
CHFR-222ENST00000544093 EPHA4P54764 986 aa22.93■■□□□ 1.26
CHFR-222ENST00000544093 KCTD11Q693B1 232 aa22.93■■□□□ 1.26
CHFR-222ENST00000544093 FOXR1Q6PIV2 292 aa22.93■■□□□ 1.26
CHFR-222ENST00000544093 TRAPPC5Q8IUR0 188 aa22.93■■□□□ 1.26
CHFR-222ENST00000544093 OR4K2Q8NGD2 314 aa22.93■■□□□ 1.26
CHFR-222ENST00000544093 OR4D9Q8NGE8 314 aa22.93■■□□□ 1.26
CHFR-222ENST00000544093 AHCYL2Q96HN2 611 aaKnown RBP22.93■■□□□ 1.26
CHFR-222ENST00000544093 APOL2Q9BQE5 337 aa22.93■■□□□ 1.26
CHFR-222ENST00000544093 DPH1Q9BZG8 443 aa22.93■■□□□ 1.26
CHFR-222ENST00000544093 TMPRSS11EQ9UL52 423 aa22.93■■□□□ 1.26
CHFR-222ENST00000544093 PCDHGA7Q9Y5G6 932 aa22.93■■□□□ 1.26
CHFR-222ENST00000544093 DNMT3AQ9Y6K1 912 aaPredicted RBP22.93■■□□□ 1.26
CHFR-222ENST00000544093 ZFHX4Q86UP3 3567 aa22.93■■□□□ 1.26
CHFR-222ENST00000544093 TCRBV7S2A1N4TA0A589 114 aa22.92■■□□□ 1.26
CHFR-222ENST00000544093 KLHL33A6NCF5 533 aa22.92■■□□□ 1.26
CHFR-222ENST00000544093 LIASO43766 372 aa22.92■■□□□ 1.26
CHFR-222ENST00000544093 DUX1O43812 170 aa22.92■■□□□ 1.26
CHFR-222ENST00000544093 EML2O95834 649 aa22.92■■□□□ 1.26
CHFR-222ENST00000544093 UGT1A5P35504 534 aa22.92■■□□□ 1.26
CHFR-222ENST00000544093 COL28A1Q2UY09 1125 aa22.92■■□□□ 1.26
CHFR-222ENST00000544093 PHF19Q5T6S3 580 aa22.92■■□□□ 1.26
CHFR-222ENST00000544093 C19orf48Q6RUI8 117 aa22.92■■□□□ 1.26
CHFR-222ENST00000544093 WASH2PQ6VEQ5 465 aa22.92■■□□□ 1.26
CHFR-222ENST00000544093 LINC00523Q86TU6 105 aa22.92■■□□□ 1.26
CHFR-222ENST00000544093 ZNF547Q8IVP9 402 aa22.92■■□□□ 1.26
CHFR-222ENST00000544093 ZNF398Q8TD17 642 aa22.92■■□□□ 1.26
CHFR-222ENST00000544093 RDH14Q9HBH5 336 aa22.92■■□□□ 1.26
CHFR-222ENST00000544093 WASH6PQ9NQA3 447 aa22.92■■□□□ 1.26
CHFR-222ENST00000544093 LOXL2Q9Y4K0 774 aa22.92■■□□□ 1.26
CHFR-222ENST00000544093 ZFYVE26Q68DK2 2539 aa22.92■■□□□ 1.26
CHFR-222ENST00000544093 GAPDHSO14556 408 aaPredicted RBP22.91■■□□□ 1.26
CHFR-222ENST00000544093 BUD23O43709 281 aaKnown RBP22.91■■□□□ 1.26
CHFR-222ENST00000544093 SRP72O76094 671 aaKnown RBP22.91■■□□□ 1.26
CHFR-222ENST00000544093 METTL18O95568 372 aa22.91■■□□□ 1.26
CHFR-222ENST00000544093 IDSP22304 550 aa22.91■■□□□ 1.26
CHFR-222ENST00000544093 LIMK2P53671 638 aa22.91■■□□□ 1.26
CHFR-222ENST00000544093 GDF10P55107 478 aa22.91■■□□□ 1.26
CHFR-222ENST00000544093 CCZ1BP86790 482 aa22.91■■□□□ 1.26
CHFR-222ENST00000544093 CCZ1P86791 482 aaPredicted RBP22.91■■□□□ 1.26
CHFR-222ENST00000544093 MSLNQ13421 630 aaPredicted RBP22.91■■□□□ 1.26
CHFR-222ENST00000544093 OASLQ15646 514 aaKnown RBP22.91■■□□□ 1.26
CHFR-222ENST00000544093 LONRF2Q1L5Z9 754 aa22.91■■□□□ 1.26
CHFR-222ENST00000544093 KHDC1Q4VXA5 237 aaKnown RBP22.91■■□□□ 1.26
CHFR-222ENST00000544093 GPRC6AQ5T6X5 926 aa22.91■■□□□ 1.26
CHFR-222ENST00000544093 AGAP9Q5VTM2 703 aa22.91■■□□□ 1.26
CHFR-222ENST00000544093 DENND5AQ6IQ26 1287 aa22.91■■□□□ 1.26
CHFR-222ENST00000544093 USP53Q70EK8 1073 aa22.91■■□□□ 1.26
CHFR-222ENST00000544093 MAIP1Q8WWC4 291 aa22.91■■□□□ 1.26
CHFR-222ENST00000544093 KCNE4Q8WWG9 221 aa22.91■■□□□ 1.26
CHFR-222ENST00000544093 UCK1Q9HA47 277 aa22.91■■□□□ 1.26
CHFR-222ENST00000544093 PRDM8Q9NQV8 689 aa22.91■■□□□ 1.26
CHFR-222ENST00000544093 CPNE7Q9UBL6 633 aa22.91■■□□□ 1.26
CHFR-222ENST00000544093 ZKSCAN5Q9Y2L8 839 aa22.91■■□□□ 1.26
CHFR-222ENST00000544093 TRBV23OR9-2A0A075B6M9 112 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 PRR19A6NJB7 356 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 UGT1A9O60656 530 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 AP2A1O95782 977 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 XRCC1P18887 633 aaPredicted RBP22.9■■□□□ 1.26
CHFR-222ENST00000544093 UGT1A6P19224 532 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 MSH3P20585 1137 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 UGT1A1P22309 533 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 UGT1A4P22310 534 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 AKT1P31749 480 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 UGT1A3P35503 534 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 UCNP55089 124 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 CCDC173Q0VFZ6 552 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 NFATC2Q13469 925 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 PLA2G4EQ3MJ16 856 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 BROXQ5VW32 411 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 WDR74Q6RFH5 385 aaPredicted RBP22.9■■□□□ 1.26
CHFR-222ENST00000544093 ABRAXAS1Q6UWZ7 409 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 AMZ2Q86W34 360 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 HEXDCQ8WVB3 486 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 ATG4AQ8WYN0 398 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 ULK4Q96C45 1275 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 NUDT22Q9BRQ3 303 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 B3GNT4Q9C0J1 378 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 ZMYND15Q9H091 742 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 SEMA6CQ9H3T2 930 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 ASB8Q9H765 288 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 UGT1A7Q9HAW7 530 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 UGT1A10Q9HAW8 530 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 UGT1A8Q9HAW9 530 aa22.9■■□□□ 1.26
CHFR-222ENST00000544093 SLC23A2Q9UGH3 650 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms