RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 NEXN-AS1Q8NBZ9 246 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 HM13Q8TCT9 377 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 TRPC4APQ8TEL6 797 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 FAM234AQ9H0X4 552 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 GOLPH3LQ9H4A5 285 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 ST6GALNAC4Q9H4F1 302 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 NRIP3Q9NQ35 241 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 TINAGQ9UJW2 476 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 NOL7Q9UMY1 257 aaKnown RBP3.72□□□□□ -1.81
SCFD1-207ENST00000544052 NRXN1Q9ULB1 1477 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 TECPR2O15040 1411 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 PIK3C2GO75747 1445 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 NRAPQ86VF7 1730 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 EP400Q96L91 3159 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 KIF1AQ12756 1690 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 MYOM2P54296 1465 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 CPED1A4D0V7 1026 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 A8MXE2 369 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 SPRY1O43609 319 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-207ENST00000544052 ZIC3O60481 467 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 C22orf31O95567 290 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 EGFP01133 1207 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 MYBL1P10243 752 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 TNFRSF1BP20333 461 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 GPTP24298 496 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 CAMK2DQ13557 499 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 IL11RAQ14626 422 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 LETM2Q2VYF4 491 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 DCAF6Q58WW2 860 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 NSUN5P2Q63ZY6 315 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 IL27RAQ6UWB1 636 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 TAOK1Q7L7X3 1001 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 TRAPPC11Q7Z392 1133 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 DNAJB7Q7Z6W7 309 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-207ENST00000544052 ARID3BQ8IVW6 561 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-207ENST00000544052 CEP97Q8IW35 865 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 AADATQ8N5Z0 425 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 OR1J2Q8NGS2 313 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 HMGCLL1Q8TB92 370 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 NTN5Q8WTR8 489 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-207ENST00000544052 SLC25A28Q96A46 364 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 RMDN1Q96DB5 314 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 URB1-AS1Q96HZ7 61 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 LINC00615Q96LM1 132 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-207ENST00000544052 NUDCD1Q96RS6 583 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 TRMOQ9BU70 441 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 FAM129AQ9BZQ8 928 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 ALDH8A1Q9H2A2 487 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-207ENST00000544052 OPA3Q9H6K4 179 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 CRNNQ9UBG3 495 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-207ENST00000544052 ZNF148Q9UQR1 794 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 SRPRBQ9Y5M8 271 aaKnown RBP3.72□□□□□ -1.81
SCFD1-207ENST00000544052 ADGRB1O14514 1584 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 GLI3P10071 1580 aa3.72□□□□□ -1.81
SCFD1-207ENST00000544052 ALS2Q96Q42 1657 aa3.71□□□□□ -1.81
SCFD1-207ENST00000544052 GPR75-ASB3A0A0A6YYF3 556 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 HSPA12AO43301 675 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 DAB1O75553 588 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 VNN2O95498 520 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 ARSBP15848 533 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 DNASE1P24855 282 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 HNRNPH1P31943 449 aaKnown RBP3.71□□□□□ -1.82
SCFD1-207ENST00000544052 RASSF2P50749 326 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 PTGR1Q14914 329 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 C15orf59Q2T9L4 293 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-207ENST00000544052 TCP11X2Q5H9J9 407 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 MTX3Q5HYI7 312 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 KRBOX4Q5JUW0 171 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 DUS1LQ6P1R4 473 aaKnown RBP3.71□□□□□ -1.82
SCFD1-207ENST00000544052 SLC36A4Q6YBV0 504 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 SLFN11Q7Z7L1 901 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 PRIMA1Q86XR5 153 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 HACE1Q8IYU2 909 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 BEST3Q8N1M1 668 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 RASGEF1CQ8N431 466 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 NANOGP1Q8N7R0 232 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 RBM15BQ8NDT2 890 aaKnown RBP3.71□□□□□ -1.82
SCFD1-207ENST00000544052 MCUQ8NE86 351 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 MRPS27Q92552 414 aaKnown RBP3.71□□□□□ -1.82
SCFD1-207ENST00000544052 LPGAT1Q92604 370 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 LPAR1Q92633 364 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 APBB2Q92870 758 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 SMC6Q96SB8 1091 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 DDOQ99489 341 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 SPRTNQ9H040 489 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-207ENST00000544052 PPIL3Q9H2H8 161 aaKnown RBP3.71□□□□□ -1.82
SCFD1-207ENST00000544052 CATSPERBQ9H7T0 1116 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 ZNF112Q9UJU3 913 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 TTC7AQ9ULT0 858 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-207ENST00000544052 HS3ST3B1Q9Y662 390 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 CDK12Q9NYV4 1490 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-207ENST00000544052 ADGRB2O60241 1585 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 MS4A18H0YCH9 400 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 FGBP02675 491 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 LCATP04180 440 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 RPN1P04843 607 aaKnown RBP3.71□□□□□ -1.82
SCFD1-207ENST00000544052 CYP1A2P05177 515 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 CD58P19256 250 aa3.71□□□□□ -1.82
SCFD1-207ENST00000544052 UBA1P22314 1058 aaKnown RBP3.71□□□□□ -1.82
SCFD1-207ENST00000544052 EEF1DP29692 281 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms