RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	CHMP6	Q96FZ7	201 aa		6.41	□□□□□ -1.38
CIT-213	ENST00000543324	KLHL32	Q96NJ5	620 aa		6.41	□□□□□ -1.38
CIT-213	ENST00000543324	ZNF317	Q96PQ6	595 aa	Predicted RBP	6.41	□□□□□ -1.38
CIT-213	ENST00000543324	TUBGCP5	Q96RT8	1024 aa		6.41	□□□□□ -1.38
CIT-213	ENST00000543324	KCTD15	Q96SI1	283 aa	Predicted RBP	6.41	□□□□□ -1.38
CIT-213	ENST00000543324	FOXC2	Q99958	501 aa		6.41	□□□□□ -1.38
CIT-213	ENST00000543324	MYOC	Q99972	504 aa		6.41	□□□□□ -1.38
CIT-213	ENST00000543324	PLCD4	Q9BRC7	762 aa		6.41	□□□□□ -1.38
CIT-213	ENST00000543324	BOC	Q9BWV1	1114 aa		6.41	□□□□□ -1.38
CIT-213	ENST00000543324	CHST11	Q9NPF2	352 aa		6.41	□□□□□ -1.38
CIT-213	ENST00000543324	DYRK4	Q9NR20	520 aa		6.41	□□□□□ -1.38
CIT-213	ENST00000543324	FAM114A2	Q9NRY5	505 aa		6.41	□□□□□ -1.38
CIT-213	ENST00000543324	PARVA	Q9NVD7	372 aa		6.41	□□□□□ -1.38
CIT-213	ENST00000543324	EVA1B	Q9NVM1	165 aa		6.41	□□□□□ -1.38
CIT-213	ENST00000543324	COPG2	Q9UBF2	871 aa		6.41	□□□□□ -1.38
CIT-213	ENST00000543324	PISD	Q9UG56	409 aa		6.41	□□□□□ -1.38
CIT-213	ENST00000543324	AP4E1	Q9UPM8	1137 aa		6.41	□□□□□ -1.38
CIT-213	ENST00000543324	NEU2	Q9Y3R4	380 aa		6.41	□□□□□ -1.38
CIT-213	ENST00000543324	CSNK1G3	Q9Y6M4	447 aa		6.41	□□□□□ -1.38
CIT-213	ENST00000543324	UNC13C	Q8NB66	2214 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	CFAP69	A5D8W1	941 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	C9orf172	C9J069	976 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324		H3BM21	787 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324		J3KR12	359 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324		K7ESM1	405 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	KRIT1	O00522	736 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	TRAFD1	O14545	582 aa	Predicted RBP	6.4	□□□□□ -1.38
CIT-213	ENST00000543324	TPP1	O14773	563 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	MUSK	O15146	869 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	CASC3	O15234	703 aa	Known RBP	6.4	□□□□□ -1.38
CIT-213	ENST00000543324	INSIG1	O15503	277 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	BUB1	O43683	1085 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	DUX1	O43812	170 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	PCDH8	O95206	1070 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	ANP32D	O95626	131 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	IGSF6	O95976	241 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	PAK4	O96013	591 aa	Predicted RBP	6.4	□□□□□ -1.38
CIT-213	ENST00000543324	SERPING1	P05155	500 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	NUDT17	P0C025	328 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	JMJD7	P0C870	316 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	NQO1	P15559	274 aa	Known RBP	6.4	□□□□□ -1.38
CIT-213	ENST00000543324	TCF4	P15884	667 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	TIMP2	P16035	220 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	VARS	P26640	1264 aa	Known RBP	6.4	□□□□□ -1.38
CIT-213	ENST00000543324	IL1R2	P27930	398 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	GCK	P35557	465 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	PCK1	P35558	622 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	MMP13	P45452	471 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	ZNF135	P52742	658 aa	Predicted RBP	6.4	□□□□□ -1.38
CIT-213	ENST00000543324	HNRNPK	P61978	463 aa	Known RBP eCLIP	6.4	□□□□□ -1.38
CIT-213	ENST00000543324	YPEL5	P62699	121 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	SLC25A11	Q02978	314 aa	Known RBP	6.4	□□□□□ -1.38
CIT-213	ENST00000543324	RALGDS	Q12967	914 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	BIRC2	Q13490	618 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	GRM3	Q14832	879 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	PPP2R5E	Q16537	467 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	DEFB109B	Q30KR1	87 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	HIBCH	Q6NVY1	386 aa	Predicted RBP	6.4	□□□□□ -1.38
CIT-213	ENST00000543324	GDPD4	Q6W3E5	623 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	MACC1	Q6ZN28	852 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	RFX8	Q6ZV50	586 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	PTAR1	Q7Z6K3	402 aa	Predicted RBP	6.4	□□□□□ -1.38
CIT-213	ENST00000543324	CPLX4	Q7Z7G2	160 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	HOOK3	Q86VS8	718 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	DNAAF5	Q86Y56	855 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	RASGEF1C	Q8N431	466 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	NINJ1	Q92982	152 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	ITFG2	Q969R8	447 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	PGM2	Q96G03	612 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	FEM1C	Q96JP0	617 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	SLC45A3	Q96JT2	553 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	ZNF641	Q96N77	438 aa	Predicted RBP	6.4	□□□□□ -1.38
CIT-213	ENST00000543324	KRT12	Q99456	494 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	LRRC61	Q9BV99	259 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	TMEM109	Q9BVC6	243 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	CALN1	Q9BXU9	219 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	TXLNGY	Q9BZA5	131 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	SLC39A8	Q9C0K1	460 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	NSRP1	Q9H0G5	558 aa	Known RBP	6.4	□□□□□ -1.38
CIT-213	ENST00000543324	CATSPERB	Q9H7T0	1116 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	SLC24A3	Q9HC58	644 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	MCCC2	Q9HCC0	563 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	CYP4F12	Q9HCS2	524 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	GPATCH2L	Q9NWQ4	482 aa		6.4	□□□□□ -1.38
CIT-213	ENST00000543324	CNOT8	Q9UFF9	292 aa	Known RBP	6.4	□□□□□ -1.38
CIT-213	ENST00000543324	TTC7A	Q9ULT0	858 aa	Predicted RBP	6.4	□□□□□ -1.38
CIT-213	ENST00000543324	ANKRD62	A6NC57	917 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	ANKUB1	A6NFN9	424 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	STMND1	H3BQB6	276 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	PDLIM1	O00151	329 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	FPGT	O14772	594 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	CAPN5	O15484	640 aa	Predicted RBP	6.39	□□□□□ -1.39
CIT-213	ENST00000543324	LRRTM2	O43300	516 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	HTRA2	O43464	458 aa	Predicted RBP	6.39	□□□□□ -1.39
CIT-213	ENST00000543324	CREB3	O43889	395 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	GCAT	O75600	419 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	PIGN	O95427	931 aa		6.39	□□□□□ -1.39
CIT-213	ENST00000543324	FTL	P02792	175 aa	Predicted RBP	6.39	□□□□□ -1.39
CIT-213	ENST00000543324	VIM	P08670	466 aa	Known RBP	6.39	□□□□□ -1.39
CIT-213	ENST00000543324	MYBL1	P10243	752 aa		6.39	□□□□□ -1.39

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms