RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 RCAN2Q14206 197 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 INPP5AQ14642 412 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 PTPRCAPQ14761 206 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 POLD3Q15054 466 aaPredicted RBP5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 DDR2Q16832 855 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 PFKFB4Q16877 469 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 TRIM71Q2Q1W2 868 aaKnown RBP5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 SLC36A3Q495N2 470 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 VPS26BQ4G0F5 336 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 PITRM1Q5JRX3 1037 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 GNASQ5JWF2 1037 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 SDHAF4Q5VUM1 108 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 RAP1GAP2Q684P5 730 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 CAMK1DQ8IU85 385 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 SCN4BQ8IWT1 228 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 TRPV3Q8NET8 790 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 OR4L1Q8NH43 312 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 B4GALNT2Q8NHY0 566 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 STAG3L4Q8TBR4 150 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 GRIN3AQ8TCU5 1115 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 TMEM125Q96AQ2 219 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 TMIGD2Q96BF3 282 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 ARMC5Q96C12 935 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 MYEOVQ96EZ4 313 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 RMND5BQ96G75 393 aaPredicted RBP5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 CENPNQ96H22 339 aaPredicted RBP5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 CDKN2AIPNLQ96HQ2 116 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 BIRC8Q96P09 236 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 NSUN5Q96P11 429 aaKnown RBP5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 KCNA7Q96RP8 456 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 CCT7Q99832 543 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 TRIM54Q9BYV2 358 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 BRINP2Q9C0B6 783 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 RETREG1Q9H6L5 497 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 SYTL2Q9HCH5 934 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 OLA1Q9NTK5 396 aaKnown RBP5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 AIG1Q9NVV5 245 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 NLE1Q9NVX2 485 aaPredicted RBP5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 ABI2Q9NYB9 513 aaPredicted RBP5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 GIMAP2Q9UG22 337 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 ZNF639Q9UID6 485 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 IKZF3Q9UKT9 509 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 ARL5AQ9Y689 179 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 OAS3Q9Y6K5 1087 aaKnown RBP5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 PDE4DIPQ5VU43 2346 aa5.16□□□□□ -1.58
ATPAF1-212ENST00000542495 TNRC18O15417 2968 aaPredicted RBP5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 GBF1Q92538 1859 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 TTC3P53804 2025 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 A0A087WXM4 84 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 TYW5A2RUC4 315 aaKnown RBP5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 TRIM64BA6NI03 449 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 RNF223E7ERA6 249 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 ANGPT2O15123 496 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 FKTNO75072 461 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 ADAMTS4O75173 837 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 ECI2O75521 394 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 RASAL1O95294 804 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 ESRRBO95718 433 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 TSPAN12O95859 305 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 TBX18O95935 607 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 NPPAP01160 153 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 SLC4A1P02730 911 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 ZDHHC11BP0C7U3 371 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 UMPSP11172 480 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 FCGR1AP12314 374 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 GFAPP14136 432 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 HGFP14210 728 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 CR2P20023 1033 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 IL10P22301 178 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 FASP25445 335 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 HOXD9P28356 352 aaPredicted RBP5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 EEF1DP29692 281 aaKnown RBP5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 ACVRL1P37023 503 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 GSK3BP49841 420 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 EEFSECP57772 596 aaKnown RBP5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 RACK1P63244 317 aaKnown RBP5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 FAM189BP81408 668 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 EFEMP1Q12805 493 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 MERTKQ12866 999 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 MTA1Q13330 715 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 CYTH1Q15438 398 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 TEAD4Q15561 434 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 KIF19Q2TAC6 998 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 PDCD4Q53EL6 469 aaKnown RBP5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 LCE2AQ5TA79 106 aaPredicted RBP5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 ANKS6Q68DC2 871 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 NADSYN1Q6IA69 706 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 CCSAPQ6IQ19 270 aaPredicted RBP5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 KRT80Q6KB66 452 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 FBXO46Q6PJ61 603 aaPredicted RBP5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 PAQR3Q6TCH7 311 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 EFL1Q7Z2Z2 1120 aaKnown RBP5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 ZNF280BQ86YH2 543 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 SPPL2CQ8IUH8 684 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 COLGALT2Q8IYK4 626 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 CMTR2Q8IYT2 770 aaKnown RBP5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 FBXO39Q8N4B4 442 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 CBR4Q8N4T8 237 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 TRIML2Q8N7C3 387 aa5.15□□□□□ -1.58
ATPAF1-212ENST00000542495 FAM47BQ8NA70 645 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms