RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 FILIP1LQ4L180 1135 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 TIGD2Q4W5G0 525 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 HSP90AA4PQ58FG1 418 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 EFHC1Q5JVL4 640 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 MIIPQ5JXC2 388 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 EOGTQ5NDL2 527 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 LY6G5CQ5SRR4 150 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 ARHGAP40Q5TG30 622 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 FAXCQ5TGI0 409 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 ICE2Q659A1 982 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 NUGGCQ68CJ6 796 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 SP5Q6BEB4 398 aaPredicted RBP5.52□□□□□ -1.53
CPSF7-220ENST00000541963 TSSK4Q6SA08 328 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 TPGS1Q6ZTW0 290 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 SYT13Q7L8C5 426 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 TMEM110Q86TL2 294 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 LONP2Q86WA8 852 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 TMEM25Q86YD3 366 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 ZDHHC17Q8IUH5 632 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 CCDC117Q8IWD4 279 aaPredicted RBP5.52□□□□□ -1.53
CPSF7-220ENST00000541963 BBS7Q8IWZ6 715 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 SLC15A3Q8IY34 581 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 ADGRG5Q8IZF4 528 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 MAML2Q8IZL2 1156 aaPredicted RBP5.52□□□□□ -1.53
CPSF7-220ENST00000541963 ZNF557Q8N988 423 aaPredicted RBP5.52□□□□□ -1.53
CPSF7-220ENST00000541963 ZBTB44Q8NCP5 570 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 MSANTD4Q8NCY6 345 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 RPLP0P6Q8NHW5 317 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 UCMAQ8WVF2 138 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 SHC3Q92529 594 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 DVL3Q92997 716 aaPredicted RBP5.52□□□□□ -1.53
CPSF7-220ENST00000541963 CHFRQ96EP1 664 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 LRIG1Q96JA1 1093 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 C8orf49Q96NF6 230 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 BBS2Q9BXC9 721 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 TEX101Q9BY14 249 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 VPS16Q9H269 839 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 LHX5Q9H2C1 402 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 SYNCQ9H7C4 482 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 OSER1Q9NX31 292 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 TAB2Q9NYJ8 693 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 BCCIPQ9P287 314 aaKnown RBP eCLIP5.52□□□□□ -1.53
CPSF7-220ENST00000541963 SLC12A6Q9UHW9 1150 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 TBC1D30Q9Y2I9 924 aa5.52□□□□□ -1.53
CPSF7-220ENST00000541963 KIF26AQ9ULI4 1882 aaPredicted RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 ZNF318Q5VUA4 2279 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 PATJQ8NI35 1801 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 FAM234BA2RU67 622 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 TYW5A2RUC4 315 aaKnown RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 YJEFN3A6XGL0 299 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 E7ENQ6 273 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 NEDD8-MDP1E9PL57 170 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 K7EQS6 105 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 NPC1O15118 1278 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 MDM4O15151 490 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 IRAK2O43187 625 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 TIMM44O43615 452 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 CCNT2O60583 730 aaKnown RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 TULP3O75386 442 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 APBB3O95704 486 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 CAVIN2O95810 425 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 ELANEP08246 267 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 SLC2A3P11169 496 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 UCHL3P15374 230 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 PPIFP30405 207 aaKnown RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 OPRD1P41143 372 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 STAT1P42224 750 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 GRK6P43250 576 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 RPL34P49207 117 aaKnown RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 PGFP49763 221 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 ZNF134P52741 427 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 COPB1P53618 953 aaKnown RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 YWHAZP63104 245 aaKnown RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 MC2RQ01718 297 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 UBXN1Q04323 297 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 SLC20A2Q08357 652 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 BYSLQ13895 437 aaKnown RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 SIM2Q14190 667 aaPredicted RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 DMC1Q14565 340 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 DRAP1Q14919 205 aaPredicted RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 KRT31Q15323 416 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 SYCP1Q15431 976 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 CYP2A13Q16696 494 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 GEN1Q17RS7 908 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 KLHL40Q2TBA0 621 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 MPPE1Q53F39 396 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 USP39Q53GS9 565 aaKnown RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 RBM20Q5T481 1227 aaKnown RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 B3GNTL1Q67FW5 361 aaPredicted RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 CAVIN1Q6NZI2 390 aaKnown RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 MSANTD2Q6P1R3 559 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 DENND1BQ6P3S1 775 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 GJB7Q6PEY0 223 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 Q6ZS52 159 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 C11orf57Q6ZUT1 292 aaPredicted RBP5.51□□□□□ -1.53
CPSF7-220ENST00000541963 WDR5BQ86VZ2 330 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 ZNF677Q86XU0 584 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 PALM2Q8IXS6 379 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 FAM71AQ8IYT1 594 aa5.51□□□□□ -1.53
CPSF7-220ENST00000541963 CPXM2Q8N436 756 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms