RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 KPNA2P52292 529 aaKnown RBP8.6□□□□□ -1.03
THBS3-210ENST00000541576 ELP6Q0PNE2 266 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 BST1Q10588 318 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 PDAP1Q13442 181 aaKnown RBP8.6□□□□□ -1.03
THBS3-210ENST00000541576 CUL3Q13618 768 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 CSHL1Q14406 222 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 PON2Q15165 354 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 FAM83EQ2M2I3 478 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 C2orf27AQ580R0 203 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 FAM46CQ5VWP2 391 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 ERN2Q76MJ5 926 aaKnown RBP8.6□□□□□ -1.03
THBS3-210ENST00000541576 TRIM74Q86UV6 250 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 TRIM73Q86UV7 250 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 RBFAQ8N0V3 343 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 NXPE1Q8N323 547 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 SNRNP27Q8WVK2 155 aaKnown RBP8.6□□□□□ -1.03
THBS3-210ENST00000541576 SCYL1Q96KG9 808 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 RAB3IPQ96QF0 476 aaPredicted RBP8.6□□□□□ -1.03
THBS3-210ENST00000541576 C20orf27Q9GZN8 174 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 FAM83DQ9H4H8 585 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 DENND2DQ9H6A0 471 aaPredicted RBP8.6□□□□□ -1.03
THBS3-210ENST00000541576 POPDC3Q9HBV1 291 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 IGSF5Q9NSI5 407 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 COPG2Q9UBF2 871 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 FAM50BQ9Y247 325 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 ITM2BQ9Y287 266 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 CKAP5Q14008 2032 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 NVLO15381 856 aaKnown RBP8.6□□□□□ -1.03
THBS3-210ENST00000541576 RNASEH1O60930 286 aaKnown RBP8.6□□□□□ -1.03
THBS3-210ENST00000541576 PEX11AO75192 247 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 LTA4HP09960 611 aaKnown RBP8.6□□□□□ -1.03
THBS3-210ENST00000541576 CCDC166P0CW27 439 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 ADRB3P13945 408 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 CPA3P15088 417 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 SLC26A3P40879 764 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 ETV3P41162 512 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 ROR2Q01974 943 aaKnown RBP8.6□□□□□ -1.03
THBS3-210ENST00000541576 CAMK2GQ13555 558 aaPredicted RBP8.6□□□□□ -1.03
THBS3-210ENST00000541576 ITGA9Q13797 1035 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 SMAD2Q15796 467 aaKnown RBP8.6□□□□□ -1.03
THBS3-210ENST00000541576 ATP13A5Q4VNC0 1218 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 KHDC1Q4VXA5 237 aaKnown RBP8.6□□□□□ -1.03
THBS3-210ENST00000541576 SETMARQ53H47 684 aaPredicted RBP8.6□□□□□ -1.03
THBS3-210ENST00000541576 CTSL3PQ5NE16 218 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 AGAP9Q5VTM2 703 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 ATG14Q6ZNE5 492 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 Q6ZVL8 140 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 ARHGAP22Q7Z5H3 698 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 FSTL5Q8N475 847 aaPredicted RBP8.6□□□□□ -1.03
THBS3-210ENST00000541576 HIPK4Q8NE63 616 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 NAT14Q8WUY8 206 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 HEXDCQ8WVB3 486 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 UBXN10Q96LJ8 280 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 CLPBQ9H078 707 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 VCXQ9H320 206 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 ARHGEF3Q9NR81 526 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 RAD18Q9NS91 495 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 NMRK1Q9NWW6 199 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 GALPQ9UBC7 116 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 MID2Q9UJV3 735 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 PCDHB1Q9Y5F3 818 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 COMMD10Q9Y6G5 202 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 RGSL1A5PLK6 1076 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 A6NHS1 94 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 AGAP14A8MT82 685 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 TARM1B6A8C7 271 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 H0Y858 1186 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 TK2O00142 265 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 PLK4O00444 970 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 KLF11O14901 512 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 VPS26AO75436 327 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 EGFP01133 1207 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 FESP07332 822 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 TPBGLP0DKB5 382 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 FGF3P11487 239 aaPredicted RBP8.59□□□□□ -1.03
THBS3-210ENST00000541576 DCDC1P59894 354 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 GRSF1Q12849 480 aaKnown RBP eCLIP8.59□□□□□ -1.03
THBS3-210ENST00000541576 TBC1D25Q3MII6 688 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 TMEM196Q5HYL7 178 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 SDE2Q6IQ49 451 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 LRRC8EQ6NSJ5 796 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 KLC3Q6P597 504 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 LIPIQ6XZB0 460 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 SCAMP4Q969E2 229 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 MCUR1Q96AQ8 359 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 ULK4Q96C45 1275 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 WRAP53Q9BUR4 548 aaKnown RBP8.59□□□□□ -1.03
THBS3-210ENST00000541576 SPATA16Q9BXB7 569 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 HDAC8Q9BY41 377 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 CDH19Q9H159 772 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 RSPH9Q9H1X1 276 aaPredicted RBP8.59□□□□□ -1.03
THBS3-210ENST00000541576 P2RY12Q9H244 342 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 XPR1Q9UBH6 696 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 E5RI56 91 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 PSMD11O00231 422 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 NEMP1O14524 444 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 TXNDC9O14530 226 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 AREL1O15033 823 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 SPINT1O43278 529 aa8.59□□□□□ -1.03
THBS3-210ENST00000541576 NIPSNAP2O75323 286 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms