RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 WISP2O76076 250 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 AMBPP02760 352 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 PRSS1P07477 247 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 TMEM11P17152 192 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 PRAMEP78395 509 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 SETQ01105 290 aaPredicted RBP5.71□□□□□ -1.5
YBX3-210ENST00000540975 LRMPQ12912 555 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 MAMLD1Q13495 774 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 FAM72AQ5TYM5 149 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 FAAH2Q6GMR7 532 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 JADE1Q6IE81 842 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 FAM72DQ6L9T8 149 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 IKBIPQ70UQ0 350 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 FAM72BQ86X60 149 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 PM20D2Q8IYS1 436 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 SLC5A8Q8N695 610 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 GCSAMQ8N6F7 178 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 RBM15BQ8NDT2 890 aaKnown RBP5.71□□□□□ -1.5
YBX3-210ENST00000540975 KLHDC9Q8NEP7 349 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 TRPC4APQ8TEL6 797 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 USP6NLQ92738 828 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 FBXO17Q96EF6 278 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 CMTM3Q96MX0 182 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 OR2A14Q96R47 310 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 NCAPGQ9BPX3 1015 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 SMC4Q9NTJ3 1288 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 GAB2Q9UQC2 676 aa5.71□□□□□ -1.5
YBX3-210ENST00000540975 TMEM184BQ9Y519 407 aaPredicted RBP5.71□□□□□ -1.5
YBX3-210ENST00000540975 FRMD3A2A2Y4 597 aa5.7□□□□□ -1.5
YBX3-210ENST00000540975 MYO1GB0I1T2 1018 aa5.7□□□□□ -1.5
YBX3-210ENST00000540975 ANKRD66B4E2M5 251 aa5.7□□□□□ -1.5
YBX3-210ENST00000540975 F5H0A9 414 aaPredicted RBP5.7□□□□□ -1.5
YBX3-210ENST00000540975 MAP2K7O14733 419 aa5.7□□□□□ -1.5
YBX3-210ENST00000540975 GAS8-AS1O95177 125 aa5.7□□□□□ -1.5
YBX3-210ENST00000540975 CFC1BP0CG36 223 aa5.7□□□□□ -1.5
YBX3-210ENST00000540975 CFC1P0CG37 223 aa5.7□□□□□ -1.5
YBX3-210ENST00000540975 ANXA7P20073 488 aaKnown RBP5.7□□□□□ -1.5
YBX3-210ENST00000540975 TNFAIP3P21580 790 aa5.7□□□□□ -1.5
YBX3-210ENST00000540975 HRH2P25021 359 aa5.7□□□□□ -1.5
YBX3-210ENST00000540975 ARL3P36405 182 aa5.7□□□□□ -1.5
YBX3-210ENST00000540975 CRIP2P52943 208 aaPredicted RBP5.7□□□□□ -1.5
YBX3-210ENST00000540975 MLLT10P55197 1068 aa5.7□□□□□ -1.5
YBX3-210ENST00000540975 ACVR2BQ13705 512 aa5.7□□□□□ -1.5
YBX3-210ENST00000540975 PLXDC2Q6UX71 529 aa5.7□□□□□ -1.5
YBX3-210ENST00000540975 CCDC190Q86UF4 302 aa5.7□□□□□ -1.5
YBX3-210ENST00000540975 ZBTB8BQ8NAP8 495 aaPredicted RBP5.7□□□□□ -1.5
YBX3-210ENST00000540975 PPHLN1Q8NEY8 458 aaKnown RBP5.7□□□□□ -1.5
YBX3-210ENST00000540975 RDM1Q8NG50 284 aa5.7□□□□□ -1.5
YBX3-210ENST00000540975 ABHD8Q96I13 439 aa5.7□□□□□ -1.5
YBX3-210ENST00000540975 KAT14Q9H8E8 782 aa5.7□□□□□ -1.5
YBX3-210ENST00000540975 SETD4Q9NVD3 440 aa5.7□□□□□ -1.5
YBX3-210ENST00000540975 GPC4O75487 556 aa5.69□□□□□ -1.5
YBX3-210ENST00000540975 OR2C1O95371 312 aa5.69□□□□□ -1.5
YBX3-210ENST00000540975 BAG4O95429 457 aaKnown RBP5.69□□□□□ -1.5
YBX3-210ENST00000540975 CSF2RAP15509 400 aa5.69□□□□□ -1.5
YBX3-210ENST00000540975 MAPK4P31152 587 aa5.69□□□□□ -1.5
YBX3-210ENST00000540975 CTSCP53634 463 aa5.69□□□□□ -1.5
YBX3-210ENST00000540975 RAB6CQ53S08 254 aa5.69□□□□□ -1.5
YBX3-210ENST00000540975 ACSM2BQ68CK6 577 aa5.69□□□□□ -1.5
YBX3-210ENST00000540975 SLC27A1Q6PCB7 646 aa5.69□□□□□ -1.5
YBX3-210ENST00000540975 PIWIL4Q7Z3Z4 852 aaKnown RBP5.69□□□□□ -1.5
YBX3-210ENST00000540975 CEP97Q8IW35 865 aa5.69□□□□□ -1.5
YBX3-210ENST00000540975 GBGT1Q8N5D6 347 aa5.69□□□□□ -1.5
YBX3-210ENST00000540975 EVI5LQ96CN4 794 aa5.69□□□□□ -1.5
YBX3-210ENST00000540975 ELMOD3Q96FG2 381 aa5.69□□□□□ -1.5
YBX3-210ENST00000540975 DUX3Q96PT4 197 aa5.69□□□□□ -1.5
YBX3-210ENST00000540975 GFI1Q99684 422 aa5.69□□□□□ -1.5
YBX3-210ENST00000540975 RAB6CQ9H0N0 254 aa5.69□□□□□ -1.5
YBX3-210ENST00000540975 UPF2Q9HAU5 1272 aaKnown RBP5.69□□□□□ -1.5
YBX3-210ENST00000540975 TRMT1Q9NXH9 659 aaKnown RBP5.69□□□□□ -1.5
YBX3-210ENST00000540975 MAP3K20Q9NYL2 800 aaKnown RBP5.69□□□□□ -1.5
YBX3-210ENST00000540975 LYVE1Q9Y5Y7 322 aa5.69□□□□□ -1.5
YBX3-210ENST00000540975 PI4KAP2A4QPH2 592 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 PGPEP1LA6NFU8 196 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 TMEM178BH3BS89 294 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 OGG1O15527 345 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 BUD23O43709 281 aaKnown RBP5.68□□□□□ -1.5
YBX3-210ENST00000540975 PRKNO60260 465 aaPredicted RBP5.68□□□□□ -1.5
YBX3-210ENST00000540975 ZNF217O75362 1048 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 PAK4O96013 591 aaPredicted RBP5.68□□□□□ -1.5
YBX3-210ENST00000540975 TFAP2AP05549 437 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 FGF5P12034 268 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 PAX3P23760 479 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 PPARGP37231 505 aaPredicted RBP5.68□□□□□ -1.5
YBX3-210ENST00000540975 DCTP40126 519 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 MSH2P43246 934 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 GPR143P51810 404 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 MRGPRG-AS1Q2M3A8 158 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 PCGF3Q3KNV8 242 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 TMEM198Q66K66 360 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 CFAP77Q6ZQR2 320 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 CLEC17AQ6ZS10 378 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 GSDMBQ8TAX9 411 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 UBE2Q2Q8WVN8 375 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 TFB2MQ9H5Q4 396 aaKnown RBP5.68□□□□□ -1.5
YBX3-210ENST00000540975 SH2D4AQ9H788 454 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 TRPC7Q9HCX4 862 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 DBNLQ9UJU6 430 aaKnown RBP5.68□□□□□ -1.5
YBX3-210ENST00000540975 B3GALT5Q9Y2C3 310 aa5.68□□□□□ -1.5
YBX3-210ENST00000540975 A0A0G2JNG1 304 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms