RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 KERAO60938 352 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 SUPT3HO75486 399 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 PYGLP06737 847 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 CYP2A6P11509 494 aaPredicted RBP12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 NCF1P14598 390 aaPredicted RBP12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 AGTR2P50052 363 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 ALDH18A1P54886 795 aaKnown RBP12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 CDH13P55290 713 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 KCNJ2P63252 427 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 PFKFB4Q16877 469 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 C18orf21Q32NC0 220 aaPredicted RBP12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 GPR33Q49SQ1 333 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 GPRC6AQ5T6X5 926 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 IER5LQ5T953 404 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 TXNDC11Q6PKC3 985 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 SERPINA13PQ6UXR4 307 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 MACC1Q6ZN28 852 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 DET1Q7L5Y6 550 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 CACUL1Q86Y37 369 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 MMAAQ8IVH4 418 aaKnown RBP12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 SLC7A6OSQ96CW6 309 aaPredicted RBP12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 RIOK2Q9BVS4 552 aaKnown RBP12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 SPATA16Q9BXB7 569 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 ILKAPQ9H0C8 392 aaPredicted RBP12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 WWP1Q9H0M0 922 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 WDR55Q9H6Y2 383 aaPredicted RBP12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 ACTR5Q9H9F9 607 aaPredicted RBP12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 PRSS16Q9NQE7 514 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 DNAJC28Q9NX36 388 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 SUN2Q9UH99 717 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 ADAMTS6Q9UKP5 1117 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 PCDHB1Q9Y5F3 818 aa12.13□□□□□ -0.47
AP003559.1-201ENST00000540906 COL4A2P08572 1712 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 IGLV3-16A0A075B6K0 115 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 GOLGA8QA0A0J9YX86 632 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 GOLGA8OA6NCC3 632 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 GOLGA8NF8WBI6 632 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 PFDN6O15212 129 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 SGTAO43765 313 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 DIAPH2O60879 1101 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 DNAJC8O75937 253 aaPredicted RBP12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 ZNF30P17039 623 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 IMPDH1P20839 514 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 RPL14P50914 215 aaKnown RBP12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 PTPN5P54829 565 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 NFKB2Q00653 900 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 ZBTB16Q05516 673 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 ILF2Q12905 390 aaKnown RBP12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 HTR4Q13639 388 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 C2orf27AQ580R0 203 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 HENMT1Q5T8I9 393 aaKnown RBP12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 FRMD7Q6ZUT3 714 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 ASRGL1Q7L266 308 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 NKAPQ8N5F7 415 aaKnown RBP12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 RHEBL1Q8TAI7 183 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 OR8D1Q8WZ84 308 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 ESAMQ96AP7 390 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 L3HYPDHQ96EM0 354 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 PTCD3Q96EY7 689 aaKnown RBP12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 LRIG1Q96JA1 1093 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 RILPQ96NA2 401 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 TRMT61BQ9BVS5 477 aaKnown RBP12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 CCDC106Q9BWC9 280 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 FAM83DQ9H4H8 585 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 PKD2L2Q9NZM6 624 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 GNPTGQ9UJJ9 305 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 RNF112Q9ULX5 631 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 COMMD10Q9Y6G5 202 aa12.12□□□□□ -0.47
AP003559.1-201ENST00000540906 CAPN14A8MX76 684 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 F8W8V4 182 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 H3BQ06 376 aaPredicted RBP12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 NEMP1O14524 444 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 UNC5CO95185 931 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 PSMD8P48556 350 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 GALK1P51570 392 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 SEC13P55735 322 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 IL2P60568 153 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 ATP6V0D1P61421 351 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 HERVK_113P63132 956 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 PRKAA1Q13131 559 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 ELAVL3Q14576 367 aaKnown RBP12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 COL19A1Q14993 1142 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 PDCD2Q16342 344 aaPredicted RBP12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 AAK1Q2M2I8 961 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 ITPRIPL2Q3MIP1 535 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 CFAP157Q5JU67 520 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 SH2D4BQ5SQS7 431 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 SBSNQ6UWP8 590 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 CUZD1Q86UP6 607 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 TMIEQ8NEW7 156 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 SREK1Q8WXA9 508 aaKnown RBP12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 DLG3Q92796 817 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 INPP5DQ92835 1189 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 RIPOR3Q96MK2 946 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 COPS8Q99627 209 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 ERVK-6Q9BXR3 956 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 NUF2Q9BZD4 464 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 UTP6Q9NYH9 597 aaKnown RBP12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 FIS1Q9Y3D6 152 aa12.11□□□□□ -0.47
AP003559.1-201ENST00000540906 PRR5-ARHGAP8B1AHC4 643 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms