RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ACSBG2Q5FVE4 666 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 GARNL3Q5VVW2 1013 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 ARPINQ7Z6K5 226 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 RBM23Q86U06 439 aaKnown RBP12.5□□□□□ -0.41
DDX55-206ENST00000539934 SERINC5Q86VE9 423 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 ZDHHC14Q8IZN3 488 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 CLIP4Q8N3C7 705 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 MARVELD2Q8N4S9 558 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 NIPA2Q8N8Q9 360 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 OR6B3Q8NGW1 331 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 OR6Y1Q8NGX8 325 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 TSPEARQ8WU66 669 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 SLC7A6OSQ96CW6 309 aaPredicted RBP12.5□□□□□ -0.41
DDX55-206ENST00000539934 TRIM31Q9BZY9 425 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 IPO11Q9UI26 975 aaKnown RBP12.5□□□□□ -0.41
DDX55-206ENST00000539934 SLC24A2Q9UI40 661 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 ST3GAL5Q9UNP4 418 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 SESN1Q9Y6P5 492 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 FAM187AA6NFU0 413 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 PIRO00625 290 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 SYNCRIPO60506 623 aaKnown RBP12.5□□□□□ -0.41
DDX55-206ENST00000539934 GFRA3O60609 400 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 EFCAB14O75071 495 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 RPLP2P05387 115 aaKnown RBP12.5□□□□□ -0.41
DDX55-206ENST00000539934 CAPN3P20807 821 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 PTPN4P29074 926 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 EPHB2P29323 1055 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 PNPLA4P41247 253 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 NR4A2P43354 598 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 RECQLP46063 649 aaPredicted RBP12.5□□□□□ -0.41
DDX55-206ENST00000539934 ZNF252P-AS1Q0IIN9 211 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 DLG1Q12959 904 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 LRRC36Q1X8D7 754 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 XKR4Q5GH76 650 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 UBE2UQ5VVX9 321 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 ACOT1Q86TX2 421 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 JAMLQ86YT9 394 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 CCDC105Q8IYK2 499 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 KATNAL2Q8IYT4 538 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 C12orf29Q8N999 325 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 SPPL3Q8TCT6 385 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 PIK3R3Q92569 461 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 ZNF566Q969W8 418 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 CDADC1Q9BWV3 514 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 GOLGA2P5Q9HBQ8 144 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 FAM153AQ9UHL3 310 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 LRFN2Q9ULH4 789 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 FAM50BQ9Y247 325 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 ZFHX4Q86UP3 3567 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 KPNA7A9QM74 516 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 F8VP50 259 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 F8W8V4 182 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 FSCN2O14926 492 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 SYN3O14994 580 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 BCAS1O75363 584 aaPredicted RBP12.49□□□□□ -0.41
DDX55-206ENST00000539934 ERBB2P04626 1255 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 FAM153BP0C7A2 387 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 ENO3P13929 434 aaPredicted RBP12.49□□□□□ -0.41
DDX55-206ENST00000539934 TAF6P49848 677 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 OGDHQ02218 1023 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 GOLGA7BQ2TAP0 167 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 FAM153CQ494X1 144 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 PPM1LQ5SGD2 360 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 RETSATQ6NUM9 610 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 ERICH5Q6P6B1 374 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 LCLAT1Q6UWP7 414 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 XYLT1Q86Y38 959 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 MICU2Q8IYU8 434 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 PGBD3Q8N328 593 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 GALNT4Q8N4A0 578 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 POC1BQ8TC44 478 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 EDAQ92838 391 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 C7orf34Q96L11 122 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 MENTQ9BUN1 341 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 PINK1Q9BXM7 581 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 ACPTQ9BZG2 426 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 TRPV4Q9HBA0 871 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 MAGEE1Q9HCI5 957 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 RPRD1BQ9NQG5 326 aaKnown RBP12.49□□□□□ -0.41
DDX55-206ENST00000539934 PRDM8Q9NQV8 689 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 C20orf96Q9NUD7 363 aaPredicted RBP12.49□□□□□ -0.41
DDX55-206ENST00000539934 FAM49BQ9NUQ9 324 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 WWOXQ9NZC7 414 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 KLHL14Q9P2G3 628 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 AFF4Q9UHB7 1163 aaKnown RBP12.49□□□□□ -0.41
DDX55-206ENST00000539934 PCYOX1Q9UHG3 505 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 EP300Q09472 2414 aaPredicted RBP12.49□□□□□ -0.41
DDX55-206ENST00000539934 C12orf71A8MTZ7 269 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 MEI4A8MW99 385 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 M0R296 226 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 FZD6O60353 706 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 CIDEAO60543 219 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 TNFAIP8O95379 198 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 KRT8P05787 483 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 ACAA1P09110 424 aaPredicted RBP12.49□□□□□ -0.41
DDX55-206ENST00000539934 CCDC130P13994 396 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 PRDX6P30041 224 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 COILP38432 576 aaPredicted RBP12.49□□□□□ -0.41
DDX55-206ENST00000539934 NDUFV1P49821 464 aa12.49□□□□□ -0.41
DDX55-206ENST00000539934 RENBPP51606 427 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms