RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ATAD1Q8NBU5 361 aa14.43□□□□□ -0.1
CDCA3-207ENST00000538862 HM13Q8TCT9 377 aa14.43□□□□□ -0.1
CDCA3-207ENST00000538862 POF1BQ8WVV4 589 aa14.43□□□□□ -0.1
CDCA3-207ENST00000538862 SLC45A3Q96JT2 553 aa14.43□□□□□ -0.1
CDCA3-207ENST00000538862 NSUN5Q96P11 429 aaKnown RBP14.43□□□□□ -0.1
CDCA3-207ENST00000538862 MGME1Q9BQP7 344 aa14.43□□□□□ -0.1
CDCA3-207ENST00000538862 NUSAP1Q9BXS6 441 aaKnown RBP14.43□□□□□ -0.1
CDCA3-207ENST00000538862 POLG2Q9UHN1 485 aa14.43□□□□□ -0.1
CDCA3-207ENST00000538862 RNF112Q9ULX5 631 aa14.43□□□□□ -0.1
CDCA3-207ENST00000538862 MYRFQ9Y2G1 1151 aa14.43□□□□□ -0.1
CDCA3-207ENST00000538862 AK5Q9Y6K8 562 aa14.43□□□□□ -0.1
CDCA3-207ENST00000538862 TTC28Q96AY4 2481 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 CCDC160A6NGH7 325 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 LRRC14BA6NHZ5 514 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 FXYD1O00168 92 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 STX16O14662 325 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 AKAP10O43572 662 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 FGF18O76093 207 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 RHOBTB1O94844 696 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 ASLP04424 464 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 HMBSP08397 361 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 RPS17P08708 135 aaKnown RBP14.42□□□□□ -0.1
CDCA3-207ENST00000538862 LAG3P18627 525 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 TACR2P21452 398 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 IL10P22301 178 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 FGFR3P22607 806 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 EEF1DP29692 281 aaKnown RBP14.42□□□□□ -0.1
CDCA3-207ENST00000538862 ZNF140P52738 457 aaPredicted RBP14.42□□□□□ -0.1
CDCA3-207ENST00000538862 PITRM1Q5JRX3 1037 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 KRT80Q6KB66 452 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 AFTPHQ6ULP2 937 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 ISLR2Q6UXK2 745 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 CAMK1DQ8IU85 385 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 MYO1HQ8N1T3 1032 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 TFAP2CQ92754 450 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 LRRC58Q96CX6 371 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 SPATA17Q96L03 361 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 TRIM54Q9BYV2 358 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 MAGEH1Q9H213 219 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 CCDC68Q9H2F9 335 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 SLC52A3Q9NQ40 469 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 C8orf4Q9NR00 106 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 OLAHQ9NV23 265 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 CHCHD3Q9NX63 227 aaKnown RBP14.42□□□□□ -0.1
CDCA3-207ENST00000538862 DUS2Q9NX74 493 aaKnown RBP14.42□□□□□ -0.1
CDCA3-207ENST00000538862 SEPT3Q9UH03 358 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 GPR45Q9Y5Y3 372 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 PTGDR2Q9Y5Y4 395 aa14.42□□□□□ -0.1
CDCA3-207ENST00000538862 MYOCOSA0A1B0GUC4 107 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 DHRS12A0PJE2 317 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 TYW5A2RUC4 315 aaKnown RBP14.41□□□□□ -0.1
CDCA3-207ENST00000538862 SUPT3HB4E1H0 165 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 PDLIM1O00151 329 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 KLK8O60259 260 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 SUPT3HO75486 399 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 PRR35P0CG20 571 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 CD9P21926 228 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 SLC6A2P23975 617 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 ALDH3B2P48448 385 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 CYTH1Q15438 398 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 TAF1AQ15573 450 aaPredicted RBP14.41□□□□□ -0.1
CDCA3-207ENST00000538862 SETMARQ53H47 684 aaPredicted RBP14.41□□□□□ -0.1
CDCA3-207ENST00000538862 TBCELQ5QJ74 424 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 FAM219BQ5XKK7 198 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 TXNDC11Q6PKC3 985 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 PAQR3Q6TCH7 311 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 ARMCX6Q7L4S7 300 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 NKAPQ8N5F7 415 aaKnown RBP14.41□□□□□ -0.1
CDCA3-207ENST00000538862 TTC9BQ8N6N2 239 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 TRIML2Q8N7C3 387 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 PSKH2Q96QS6 385 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 KCNA7Q96RP8 456 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 CCT7Q99832 543 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 MRPL9Q9BYD2 267 aaKnown RBP14.41□□□□□ -0.1
CDCA3-207ENST00000538862 PFDN4Q9NQP4 134 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 CMTM6Q9NX76 183 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 TMCO1Q9UM00 188 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 SLC8A2Q9UPR5 921 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 VPS9D1Q9Y2B5 631 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 MED16Q9Y2X0 877 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 PRG3Q9Y2Y8 225 aaPredicted RBP14.41□□□□□ -0.1
CDCA3-207ENST00000538862 ARIH1Q9Y4X5 557 aaPredicted RBP14.41□□□□□ -0.1
CDCA3-207ENST00000538862 PCDHA9Q9Y5H5 950 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 CEPT1Q9Y6K0 416 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 GREB1Q4ZG55 1949 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 VWA8A3KMH1 1905 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 A0A1W2PP18 115 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 UBA6A0AVT1 1052 aaPredicted RBP14.41□□□□□ -0.1
CDCA3-207ENST00000538862 F5H5T6 163 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 ECI2O75521 394 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 CRCPO75575 148 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 SOAT2O75908 522 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 PYGLP06737 847 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 ZDHHC11BP0C7U3 371 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 LINC00032P0C843 101 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 CKMT2P17540 419 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 PSMA4P25789 261 aaKnown RBP14.41□□□□□ -0.1
CDCA3-207ENST00000538862 HOXD9P28356 352 aaPredicted RBP14.41□□□□□ -0.1
CDCA3-207ENST00000538862 FMO4P31512 558 aa14.41□□□□□ -0.1
CDCA3-207ENST00000538862 NME5P56597 212 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms