RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 NAGLUP54802 743 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 NRLP54845 237 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 CYP24A1Q07973 514 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 AANATQ16613 207 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 KLHL12Q53G59 568 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 VARS2Q5ST30 1063 aaKnown RBP12.33□□□□□ -0.44
USP3-203ENST00000538686 CASC4Q6P4E1 433 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 PIWIL4Q7Z3Z4 852 aaKnown RBP12.33□□□□□ -0.44
USP3-203ENST00000538686 STK32CQ86UX6 486 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 FAM160B2Q86V87 743 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 CDKL3Q8IVW4 592 aaPredicted RBP12.33□□□□□ -0.44
USP3-203ENST00000538686 DAW1Q8N136 415 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 VWA5B2Q8N398 1253 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 CPA6Q8N4T0 437 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 PLD5Q8N7P1 536 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 YIPF7Q8N8F6 280 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 OR7G3Q8NG95 312 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 POMGNT1Q8WZA1 660 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 AHCYL2Q96HN2 611 aaKnown RBP12.33□□□□□ -0.44
USP3-203ENST00000538686 FRMD6Q96NE9 622 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 SLC30A2Q9BRI3 323 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 CDADC1Q9BWV3 514 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 TTLL2Q9BWV7 592 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 SMOC2Q9H3U7 446 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 FAM49BQ9NUQ9 324 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 TLK1Q9UKI8 766 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 ELF5Q9UKW6 265 aaPredicted RBP12.33□□□□□ -0.44
USP3-203ENST00000538686 PNMA8BQ9ULN7 279 aaPredicted RBP12.33□□□□□ -0.44
USP3-203ENST00000538686 DAGLAQ9Y4D2 1042 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 LOC100130705A0A1B0GUX0 176 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 FAM86B1E9PN63 330 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 RNGTTO60942 597 aaKnown RBP12.33□□□□□ -0.44
USP3-203ENST00000538686 ANGPTL1O95841 491 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 TSPAN12O95859 305 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 CYP3A4P08684 503 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 FAM86B2P0C5J1 330 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 ITGALP20701 1170 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 AGXTP21549 392 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 MYL9P24844 172 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 PRDX5P30044 214 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 TGFBR2P37173 567 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 PRELPP51888 382 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 FCGRTP55899 365 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 SLC35A2P78381 396 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 FPGSQ05932 587 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 CUL2Q13617 745 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 SETMARQ53H47 684 aaPredicted RBP12.33□□□□□ -0.44
USP3-203ENST00000538686 SPANXN3Q5MJ09 141 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 ZBTB41Q5SVQ8 909 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 RETSATQ6NUM9 610 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 TMEM81Q6P7N7 255 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 KIAA1324Q6UXG2 1013 aaKnown RBP12.33□□□□□ -0.44
USP3-203ENST00000538686 ANKS3Q6ZW76 656 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 OTOP1Q7RTM1 612 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 PHC2Q8IXK0 858 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 RDH10Q8IZV5 341 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 OR8H2Q8N162 312 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 C7orf57Q8NEG2 295 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 OR8H1Q8NGG4 311 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 OR8K3Q8NH51 312 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 TMBIM1Q969X1 311 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 MBOAT4Q96T53 435 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 TSEN34Q9BSV6 310 aaKnown RBP12.33□□□□□ -0.44
USP3-203ENST00000538686 ITPAQ9BY32 194 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 EML4Q9HC35 981 aaKnown RBP12.33□□□□□ -0.44
USP3-203ENST00000538686 MCCC2Q9HCC0 563 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 MTMR4Q9NYA4 1195 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 ACSL5Q9ULC5 683 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 HSPB11Q9Y547 144 aa12.33□□□□□ -0.44
USP3-203ENST00000538686 NRCAMQ92823 1304 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 WDR27A2RRH5 827 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 G3V2T6 193 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 STX16O14662 325 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 SLC16A6O15403 523 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 RGS10O43665 173 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 PLA2G6O60733 806 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 LRIG2O94898 1065 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 CFHP08603 1231 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 POU3F3P20264 500 aaPredicted RBP12.32□□□□□ -0.44
USP3-203ENST00000538686 PRKAR1BP31321 381 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 RFX2P48378 723 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 CDK5R2Q13319 367 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 DGCR6Q14129 220 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 NKX1-1Q15270 411 aaPredicted RBP12.32□□□□□ -0.44
USP3-203ENST00000538686 ZC3H12BQ5HYM0 836 aaKnown RBP12.32□□□□□ -0.44
USP3-203ENST00000538686 PITRM1Q5JRX3 1037 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 FCRLBQ6BAA4 426 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 GLYATQ6IB77 296 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 LAIR2Q6ISS4 152 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 TMEM270Q6UE05 265 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 C15orf39Q6ZRI6 1047 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 C16orf62Q7Z3J2 963 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 CMC1Q7Z7K0 106 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 COMMD7Q86VX2 200 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 RIMKLAQ8IXN7 391 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 ZBTB44Q8NCP5 570 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 IPCEF1Q8WWN9 437 aaPredicted RBP12.32□□□□□ -0.44
USP3-203ENST00000538686 DCLRE1CQ96SD1 692 aaKnown RBP12.32□□□□□ -0.44
USP3-203ENST00000538686 ZNF416Q9BWM5 594 aa12.32□□□□□ -0.44
USP3-203ENST00000538686 ZBTB20Q9HC78 741 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms