RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 SNX20Q7Z614 316 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 ADCY4Q8NFM4 1077 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 TSPEARQ8WU66 669 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 LMLNQ96KR4 655 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 LRGUKQ96M69 825 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 ZNF382Q96SR6 550 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 CLPBQ9H078 707 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 ATP13A3Q9H7F0 1226 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 IL26Q9NPH9 171 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 SLC52A3Q9NQ40 469 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 PFDN4Q9NQP4 134 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 PLK2Q9NYY3 685 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 MAP10Q9P2G4 905 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 APPL1Q9UKG1 709 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 INTS6Q9UL03 887 aaKnown RBP11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 DTNAQ9Y4J8 743 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 TIMM22Q9Y584 194 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 GPR45Q9Y5Y3 372 aa11.3□□□□□ -0.6
SLC28A1-204ENST00000538177 TRAV19A0A0A6YYK7 116 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 C1orf232A0A0U1RR37 186 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 FGF18O76093 207 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 IGSF6O95976 241 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 CHEK2O96017 543 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 LRG1P02750 347 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 LYNP07948 512 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 LINGO3P0C6S8 592 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 CSF2RAP15509 400 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 PFKLP17858 780 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 VCLP18206 1134 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 ITGB8P26012 769 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 CD70P32970 193 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 CA5AP35218 305 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 NFATC2Q13469 925 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 PCBP2Q15366 365 aaKnown RBP eCLIP11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 GRAMD1BQ3KR37 738 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 COQ5Q5HYK3 327 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 DGKKQ5KSL6 1271 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 LYPLAL1Q5VWZ2 237 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 PTRHD1Q6GMV3 140 aaKnown RBP11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 OR52E8Q6IFG1 317 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 FAM151BQ6UXP7 276 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 ADAMTSL2Q86TH1 951 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 SPATA24Q86W54 205 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 TICAM1Q8IUC6 712 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 RBFAQ8N0V3 343 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 LILRA2Q8N149 483 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 CBARPQ8N350 705 aaPredicted RBP11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 FIBCD1Q8N539 461 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 RIN3Q8TB24 985 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 DUS3LQ96G46 650 aaKnown RBP11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 YME1L1Q96TA2 773 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 CCT7Q99832 543 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 HOPXQ9BPY8 73 aaPredicted RBP11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 SPATS2LQ9NUQ6 558 aaKnown RBP11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 EIF2B4Q9UI10 523 aaKnown RBP11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 ASB1Q9Y576 335 aa11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 TNPO3Q9Y5L0 923 aaKnown RBP11.29□□□□□ -0.6
SLC28A1-204ENST00000538177 CAPN8A6NHC0 703 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 NR5A2O00482 541 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 NRG2O14511 850 aaPredicted RBP11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 RNASEH1O60930 286 aaKnown RBP11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 CLDN7O95471 211 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 TIMP1P01033 207 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 PIM1P11309 404 aaPredicted RBP11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 BPIP17213 487 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 ITGALP20701 1170 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 CAPN3P20807 821 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 GKP32189 559 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 PTPN5P54829 565 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 HTRA3P83110 453 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 RHDQ02161 417 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 RBBP7Q16576 425 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 VPS26BQ4G0F5 336 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 RARS2Q5T160 578 aaKnown RBP11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 PRMT9Q6P2P2 845 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 BLOC1S3Q6QNY0 202 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 SBSNQ6UWP8 590 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 LAYNQ6UX15 382 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 TPGS1Q6ZTW0 290 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 CCDC149Q6ZUS6 474 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 MINDY1Q8N5J2 469 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 ICA1LQ8NDH6 482 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 CATSPER1Q8NEC5 780 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 TTC16Q8NEE8 873 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 ESAMQ96AP7 390 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 VOPP1Q96AW1 172 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 CCDC97Q96F63 343 aaPredicted RBP11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 LYSMD1Q96S90 227 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 CIPCQ9C0C6 399 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 PCDHAC1Q9H158 963 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 ASB8Q9H765 288 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 COPS7BQ9H9Q2 264 aaPredicted RBP11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 AIG1Q9NVV5 245 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 GNPTGQ9UJJ9 305 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 ST14Q9Y5Y6 855 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 DENND4CQ5VZ89 1909 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 TCRBV3S1A0A5B6 114 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 LEFTY2O00292 366 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 GIPC1O14908 333 aa11.28□□□□□ -0.6
SLC28A1-204ENST00000538177 CYBBP04839 570 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms