RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 ARL3P36405 182 aa4.84□□□□□ -1.63
PRKDC-205ENST00000535375 PPARGP37231 505 aaPredicted RBP4.84□□□□□ -1.63
PRKDC-205ENST00000535375 TSPAN7P41732 249 aa4.84□□□□□ -1.63
PRKDC-205ENST00000535375 GLIPR1P48060 266 aa4.84□□□□□ -1.63
PRKDC-205ENST00000535375 CRIP2P52943 208 aaPredicted RBP4.84□□□□□ -1.63
PRKDC-205ENST00000535375 PRAMEP78395 509 aa4.84□□□□□ -1.63
PRKDC-205ENST00000535375 ACSM2BQ68CK6 577 aa4.84□□□□□ -1.63
PRKDC-205ENST00000535375 HAUS3Q68CZ6 603 aa4.84□□□□□ -1.63
PRKDC-205ENST00000535375 SARM1Q6SZW1 724 aa4.84□□□□□ -1.63
PRKDC-205ENST00000535375 CTAGE4Q8IX94 777 aa4.84□□□□□ -1.63
PRKDC-205ENST00000535375 PM20D2Q8IYS1 436 aa4.84□□□□□ -1.63
PRKDC-205ENST00000535375 RASGEF1CQ8N431 466 aa4.84□□□□□ -1.63
PRKDC-205ENST00000535375 NEUROD6Q96NK8 337 aa4.84□□□□□ -1.63
PRKDC-205ENST00000535375 PIAS3Q9Y6X2 628 aa4.84□□□□□ -1.63
PRKDC-205ENST00000535375 TDRD9Q8NDG6 1382 aaKnown RBP4.83□□□□□ -1.64
PRKDC-205ENST00000535375 C15orf62A8K5M9 175 aa4.83□□□□□ -1.64
PRKDC-205ENST00000535375 ZBTB43O43298 467 aa4.83□□□□□ -1.64
PRKDC-205ENST00000535375 CTSCP53634 463 aa4.83□□□□□ -1.64
PRKDC-205ENST00000535375 KRT32Q14532 448 aa4.83□□□□□ -1.64
PRKDC-205ENST00000535375 CCDC6Q16204 474 aa4.83□□□□□ -1.64
PRKDC-205ENST00000535375 SFMBT2Q5VUG0 894 aa4.83□□□□□ -1.64
PRKDC-205ENST00000535375 FAAH2Q6GMR7 532 aa4.83□□□□□ -1.64
PRKDC-205ENST00000535375 CEACAM20Q6UY09 585 aa4.83□□□□□ -1.64
PRKDC-205ENST00000535375 PXKQ7Z7A4 578 aa4.83□□□□□ -1.64
PRKDC-205ENST00000535375 TEX11Q8IYF3 940 aa4.83□□□□□ -1.64
PRKDC-205ENST00000535375 OR10V1Q8NGI7 309 aa4.83□□□□□ -1.64
PRKDC-205ENST00000535375 GSDMBQ8TAX9 411 aa4.83□□□□□ -1.64
PRKDC-205ENST00000535375 EGLN2Q96KS0 407 aa4.83□□□□□ -1.64
PRKDC-205ENST00000535375 TFB2MQ9H5Q4 396 aaKnown RBP4.83□□□□□ -1.64
PRKDC-205ENST00000535375 KAT14Q9H8E8 782 aa4.83□□□□□ -1.64
PRKDC-205ENST00000535375 TRPC7Q9HCX4 862 aa4.83□□□□□ -1.64
PRKDC-205ENST00000535375 MTMR10Q9NXD2 777 aa4.83□□□□□ -1.64
PRKDC-205ENST00000535375 JRKLQ9Y4A0 524 aa4.83□□□□□ -1.64
PRKDC-205ENST00000535375 A0A1W2PP11 408 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 PMS2P5A8MQ11 134 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 MYO1GB0I1T2 1018 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 CTSVO60911 334 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 PDE9AO76083 593 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 BAG4O95429 457 aaKnown RBP4.82□□□□□ -1.64
PRKDC-205ENST00000535375 AMBPP02760 352 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 KRT19P08727 400 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 CFC1BP0CG36 223 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 CFC1P0CG37 223 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 ACTN1P12814 892 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 ANXA7P20073 488 aaKnown RBP4.82□□□□□ -1.64
PRKDC-205ENST00000535375 MCCP23508 829 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 CD81P60033 236 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 RUNX1T1Q06455 604 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 EIF4A2Q14240 407 aaKnown RBP4.82□□□□□ -1.64
PRKDC-205ENST00000535375 GKAP1Q5VSY0 366 aaPredicted RBP4.82□□□□□ -1.64
PRKDC-205ENST00000535375 TMEM154Q6P9G4 183 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 KLHL35Q6PF15 583 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 DGLUCYQ7Z3D6 616 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 PIWIL4Q7Z3Z4 852 aaKnown RBP4.82□□□□□ -1.64
PRKDC-205ENST00000535375 LONP2Q86WA8 852 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 GBGT1Q8N5D6 347 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 GCSAMQ8N6F7 178 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 KLHDC9Q8NEP7 349 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 HDAC2Q92769 488 aaKnown RBP4.82□□□□□ -1.64
PRKDC-205ENST00000535375 OXNAD1Q96HP4 312 aaPredicted RBP4.82□□□□□ -1.64
PRKDC-205ENST00000535375 SCRT2Q9NQ03 307 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 KRT84Q9NSB2 600 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 KLHL9Q9P2J3 617 aa4.82□□□□□ -1.64
PRKDC-205ENST00000535375 DBNLQ9UJU6 430 aaKnown RBP4.82□□□□□ -1.64
PRKDC-205ENST00000535375 CORO1CQ9ULV4 474 aaPredicted RBP4.82□□□□□ -1.64
PRKDC-205ENST00000535375 H0YIN7 160 aa4.81□□□□□ -1.64
PRKDC-205ENST00000535375 SMAD9O15198 467 aaKnown RBP4.81□□□□□ -1.64
PRKDC-205ENST00000535375 OGG1O15527 345 aa4.81□□□□□ -1.64
PRKDC-205ENST00000535375 PCDH7O60245 1069 aa4.81□□□□□ -1.64
PRKDC-205ENST00000535375 PRKNO60260 465 aaPredicted RBP4.81□□□□□ -1.64
PRKDC-205ENST00000535375 TMCC2O75069 709 aa4.81□□□□□ -1.64
PRKDC-205ENST00000535375 BMP10O95393 424 aa4.81□□□□□ -1.64
PRKDC-205ENST00000535375 CD4P01730 458 aa4.81□□□□□ -1.64
PRKDC-205ENST00000535375 TFAP2AP05549 437 aa4.81□□□□□ -1.64
PRKDC-205ENST00000535375 INHBAP08476 426 aa4.81□□□□□ -1.64
PRKDC-205ENST00000535375 RARGP13631 454 aa4.81□□□□□ -1.64
PRKDC-205ENST00000535375 MSH2P43246 934 aa4.81□□□□□ -1.64
PRKDC-205ENST00000535375 SETQ01105 290 aaPredicted RBP4.81□□□□□ -1.64
PRKDC-205ENST00000535375 MAMLD1Q13495 774 aa4.81□□□□□ -1.64
PRKDC-205ENST00000535375 PACS1Q6VY07 963 aa4.81□□□□□ -1.64
PRKDC-205ENST00000535375 Q75L30 129 aa4.81□□□□□ -1.64
PRKDC-205ENST00000535375 TICAM1Q8IUC6 712 aa4.81□□□□□ -1.64
PRKDC-205ENST00000535375 C1orf52Q8N6N3 182 aaKnown RBP4.81□□□□□ -1.64
PRKDC-205ENST00000535375 SLC38A9Q8NBW4 561 aa4.81□□□□□ -1.64
PRKDC-205ENST00000535375 RBM15BQ8NDT2 890 aaKnown RBP4.81□□□□□ -1.64
PRKDC-205ENST00000535375 TM9SF4Q92544 642 aa4.81□□□□□ -1.64
PRKDC-205ENST00000535375 F2RL3Q96RI0 385 aa4.81□□□□□ -1.64
PRKDC-205ENST00000535375 MUC13Q9H3R2 512 aa4.81□□□□□ -1.64
PRKDC-205ENST00000535375 SESN1Q9Y6P5 492 aa4.81□□□□□ -1.64
PRKDC-205ENST00000535375 A0A0G2JNG1 304 aa4.8□□□□□ -1.64
PRKDC-205ENST00000535375 A0A1W2PPI3 338 aa4.8□□□□□ -1.64
PRKDC-205ENST00000535375 HS6ST1O60243 411 aa4.8□□□□□ -1.64
PRKDC-205ENST00000535375 CGAP01215 116 aa4.8□□□□□ -1.64
PRKDC-205ENST00000535375 LAMP2P13473 410 aa4.8□□□□□ -1.64
PRKDC-205ENST00000535375 NR1D1P20393 614 aa4.8□□□□□ -1.64
PRKDC-205ENST00000535375 PAX3P23760 479 aa4.8□□□□□ -1.64
PRKDC-205ENST00000535375 CRYMQ14894 314 aa4.8□□□□□ -1.64
PRKDC-205ENST00000535375 KIR2DS3Q14952 304 aa4.8□□□□□ -1.64
PRKDC-205ENST00000535375 KIR2DS5Q14953 304 aa4.8□□□□□ -1.64
PRKDC-205ENST00000535375 ZDHHC20Q5W0Z9 365 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms