RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 IL17CQ9P0M4 197 aa13.22□□□□□ -0.29
CAPN1-207ENST00000527189 CPNE7Q9UBL6 633 aa13.22□□□□□ -0.29
CAPN1-207ENST00000527189 SPO11Q9Y5K1 396 aa13.22□□□□□ -0.29
CAPN1-207ENST00000527189 CCDC66A2RUB6 948 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 LILRA5A6NI73 299 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 AURKAO14965 403 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 SNX2O60749 519 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 ANXA9O76027 345 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 ITGB2P05107 769 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 ZNF7P17097 686 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-207ENST00000527189 VCLP18206 1134 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 PTPN7P35236 360 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 CETN2P41208 172 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 ZNF75DP51815 510 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 UBE2IP63279 158 aaKnown RBP13.21□□□□□ -0.29
CAPN1-207ENST00000527189 TMEM115Q12893 351 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-207ENST00000527189 NFATC2Q13469 925 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 LLGL1Q15334 1064 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 TGIF1Q15583 401 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 SLC1A5Q15758 541 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 SIRPB2Q5JXA9 342 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 ABRAXAS1Q6UWZ7 409 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 ZFAND4Q86XD8 727 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 PLXDC1Q8IUK5 500 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 RBM12BQ8IXT5 1001 aaKnown RBP13.21□□□□□ -0.29
CAPN1-207ENST00000527189 ZNF843Q8N446 348 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 ZSCAN1Q8NBB4 408 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 KRT35Q92764 455 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 SGF29Q96ES7 293 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 TTC25Q96NG3 672 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 ZPBPQ9BS86 351 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 IL26Q9NPH9 171 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 PRDM8Q9NQV8 689 aa13.21□□□□□ -0.29
CAPN1-207ENST00000527189 DNMT3AQ9Y6K1 912 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-207ENST00000527189 PRR19A6NJB7 356 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 SLC4A1P02730 911 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 IDSP22304 550 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 SPAM1P38567 509 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 MARCKSL1P49006 195 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 PPM1FP49593 454 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-207ENST00000527189 ATP1A2P50993 1020 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 GEMP55040 296 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 GTF2H3Q13889 308 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 NOMO1Q15155 1222 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 INSCQ1MX18 579 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 ATP13A5Q4VNC0 1218 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 FAM182AQ5T1J6 154 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 ZNF648Q5T619 568 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-207ENST00000527189 DCAF12Q5T6F0 453 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 CCDC181Q5TID7 509 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 AGAP9Q5VTM2 703 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 ITPRIPL1Q6GPH6 555 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 ZNF605Q86T29 641 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 ZNF761Q86XN6 746 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-207ENST00000527189 ZNF547Q8IVP9 402 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 TTC30BQ8N4P2 665 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 NCSTNQ92542 709 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 OXNAD1Q96HP4 312 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-207ENST00000527189 PPP1R2P1Q96PQ5 205 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 C19orf43Q9BQ61 176 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 HEMGNQ9BXL5 484 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 FSD1LQ9BXM9 530 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 ZCCHC2Q9C0B9 1178 aaKnown RBP13.2□□□□□ -0.3
CAPN1-207ENST00000527189 ZMYND15Q9H091 742 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 OSGEPL1Q9H4B0 414 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 BPIFA1Q9NP55 256 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 ARFGAP3Q9NP61 516 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 FBXO8Q9NRD0 319 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 POT1Q9NUX5 634 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 SLC39A1Q9NY26 324 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 TMEM9Q9P0T7 183 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 SLC23A2Q9UGH3 650 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 RSPH14Q9UHP6 348 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 TMPRSS11EQ9UL52 423 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 TFR2Q9UP52 801 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 AAR2Q9Y312 384 aaKnown RBP13.2□□□□□ -0.3
CAPN1-207ENST00000527189 PKP3Q9Y446 797 aa13.2□□□□□ -0.3
CAPN1-207ENST00000527189 SOWAHDA6NJG2 315 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 H7C0C1 242 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 AGRPO00253 132 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 TOX3O15405 576 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-207ENST00000527189 VIPP01282 170 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 MPSTP25325 297 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 CTNNA2P26232 953 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 RBL1P28749 1068 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 ATP5OP48047 213 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 NAP1L1P55209 391 aaKnown RBP13.19□□□□□ -0.3
CAPN1-207ENST00000527189 RWDD2BP57060 319 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 MC2RQ01718 297 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 ITGA9Q13797 1035 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 LDLRAP1Q5SW96 308 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 RANBP10Q6VN20 620 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 TMEM26Q6ZUK4 368 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 GLT6D1Q7Z4J2 308 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 SLC25A41Q8N5S1 370 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 BMPERQ8N8U9 685 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 IPMKQ8NFU5 416 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 GDAP1Q8TB36 358 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 ART4Q93070 314 aa13.19□□□□□ -0.3
CAPN1-207ENST00000527189 HAUS1Q96CS2 278 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms