RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 DPYSL5Q9BPU6 564 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 UGT1A7Q9HAW7 530 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 UGT1A10Q9HAW8 530 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 UGT1A8Q9HAW9 530 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 AKAP7Q9P0M2 348 aaPredicted RBP17.28■□□□□ 0.36
NR1H3-228ENST00000525441 ZNF148Q9UQR1 794 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 COL27A1Q8IZC6 1860 aaPredicted RBP17.28■□□□□ 0.36
NR1H3-228ENST00000525441 ZFC3H1O60293 1989 aaKnown RBP17.28■□□□□ 0.36
NR1H3-228ENST00000525441 A6NCN8 305 aa17.27■□□□□ 0.36
NR1H3-228ENST00000525441 KCNJ13O60928 360 aa17.27■□□□□ 0.36
NR1H3-228ENST00000525441 EML2O95834 649 aa17.27■□□□□ 0.36
NR1H3-228ENST00000525441 HADHAP40939 763 aa17.27■□□□□ 0.36
NR1H3-228ENST00000525441 PPM1FP49593 454 aaPredicted RBP17.27■□□□□ 0.36
NR1H3-228ENST00000525441 GPLD1P80108 840 aa17.27■□□□□ 0.36
NR1H3-228ENST00000525441 OASLQ15646 514 aaKnown RBP17.27■□□□□ 0.36
NR1H3-228ENST00000525441 PLA2G4EQ3MJ16 856 aa17.27■□□□□ 0.36
NR1H3-228ENST00000525441 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.27■□□□□ 0.36
NR1H3-228ENST00000525441 PHF19Q5T6S3 580 aa17.27■□□□□ 0.36
NR1H3-228ENST00000525441 GPRC6AQ5T6X5 926 aa17.27■□□□□ 0.36
NR1H3-228ENST00000525441 DENND5AQ6IQ26 1287 aa17.27■□□□□ 0.36
NR1H3-228ENST00000525441 LINC00523Q86TU6 105 aa17.27■□□□□ 0.36
NR1H3-228ENST00000525441 ZNF248Q8NDW4 579 aa17.27■□□□□ 0.36
NR1H3-228ENST00000525441 OR10G6Q8NH81 332 aa17.27■□□□□ 0.36
NR1H3-228ENST00000525441 HNRNPLLQ8WVV9 542 aaKnown RBP17.27■□□□□ 0.36
NR1H3-228ENST00000525441 C1orf54Q8WWF1 131 aa17.27■□□□□ 0.36
NR1H3-228ENST00000525441 AHCYL2Q96HN2 611 aaKnown RBP17.27■□□□□ 0.36
NR1H3-228ENST00000525441 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.27■□□□□ 0.36
NR1H3-228ENST00000525441 ZMYND15Q9H091 742 aa17.27■□□□□ 0.36
NR1H3-228ENST00000525441 ASCL3Q9NQ33 180 aa17.27■□□□□ 0.36
NR1H3-228ENST00000525441 FKBPLQ9UIM3 349 aa17.27■□□□□ 0.36
NR1H3-228ENST00000525441 ZZEF1O43149 2961 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 IGHV1OR21-1A0A087WYE8 117 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 A0A1W2PNU3 283 aaPredicted RBP17.26■□□□□ 0.35
NR1H3-228ENST00000525441 ERI2A8K979 691 aaKnown RBP17.26■□□□□ 0.35
NR1H3-228ENST00000525441 PDZK1P1A8MUH7 402 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 GAPDHSO14556 408 aaPredicted RBP17.26■□□□□ 0.35
NR1H3-228ENST00000525441 SRP72O76094 671 aaKnown RBP17.26■□□□□ 0.35
NR1H3-228ENST00000525441 TNFSF15O95150 251 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 AP2A1O95782 977 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 IFNB1P01574 187 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 ITGA2BP08514 1039 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 JMJD7P0C870 316 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 MSH3P20585 1137 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 IDSP22304 550 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 CD1CP29017 333 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 AKT1P31749 480 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 FDFT1P37268 417 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 ABCG1P45844 678 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 ZNF140P52738 457 aaPredicted RBP17.26■□□□□ 0.35
NR1H3-228ENST00000525441 MSLNQ13421 630 aaPredicted RBP17.26■□□□□ 0.35
NR1H3-228ENST00000525441 SQSTM1Q13501 440 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 PTPRCAPQ14761 206 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 LONRF2Q1L5Z9 754 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 C19orf48Q6RUI8 117 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 USP53Q70EK8 1073 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 ZNF547Q8IVP9 402 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 SLITRK4Q8IW52 837 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 CCDC89Q8N998 374 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 ULK4Q96C45 1275 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 ZNF514Q96K75 400 aaPredicted RBP17.26■□□□□ 0.35
NR1H3-228ENST00000525441 CMKLR1Q99788 373 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 ASB8Q9H765 288 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 RDH14Q9HBH5 336 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 PRDM8Q9NQV8 689 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 CPNE7Q9UBL6 633 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 SLC23A2Q9UGH3 650 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 DNAJC16Q9Y2G8 782 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 ZKSCAN5Q9Y2L8 839 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 KCTD3Q9Y597 815 aa17.26■□□□□ 0.35
NR1H3-228ENST00000525441 FAM208BQ5VWN6 2430 aa17.25■□□□□ 0.35
NR1H3-228ENST00000525441 E7EVH7 732 aa17.25■□□□□ 0.35
NR1H3-228ENST00000525441 DUX1O43812 170 aa17.25■□□□□ 0.35
NR1H3-228ENST00000525441 GAS8O95995 478 aa17.25■□□□□ 0.35
NR1H3-228ENST00000525441 ITGALP20701 1170 aa17.25■□□□□ 0.35
NR1H3-228ENST00000525441 LMAN1P49257 510 aa17.25■□□□□ 0.35
NR1H3-228ENST00000525441 NFATC2Q13469 925 aa17.25■□□□□ 0.35
NR1H3-228ENST00000525441 SNX1Q13596 522 aa17.25■□□□□ 0.35
NR1H3-228ENST00000525441 CCNG2Q16589 344 aa17.25■□□□□ 0.35
NR1H3-228ENST00000525441 WASH2PQ6VEQ5 465 aa17.25■□□□□ 0.35
NR1H3-228ENST00000525441 TRIM48Q8IWZ4 208 aa17.25■□□□□ 0.35
NR1H3-228ENST00000525441 TAB3Q8N5C8 712 aaPredicted RBP17.25■□□□□ 0.35
NR1H3-228ENST00000525441 RASGEF1AQ8N9B8 481 aa17.25■□□□□ 0.35
NR1H3-228ENST00000525441 OR13C4Q8NGS5 318 aa17.25■□□□□ 0.35
NR1H3-228ENST00000525441 CCDC97Q96F63 343 aaPredicted RBP17.25■□□□□ 0.35
NR1H3-228ENST00000525441 PRR11Q96HE9 360 aaPredicted RBP17.25■□□□□ 0.35
NR1H3-228ENST00000525441 NUDT22Q9BRQ3 303 aa17.25■□□□□ 0.35
NR1H3-228ENST00000525441 EPB41L1Q9H4G0 881 aa17.25■□□□□ 0.35
NR1H3-228ENST00000525441 WASH6PQ9NQA3 447 aa17.25■□□□□ 0.35
NR1H3-228ENST00000525441 CRLS1Q9UJA2 301 aa17.25■□□□□ 0.35
NR1H3-228ENST00000525441 LHX6Q9UPM6 363 aa17.25■□□□□ 0.35
NR1H3-228ENST00000525441 LOXL2Q9Y4K0 774 aa17.25■□□□□ 0.35
NR1H3-228ENST00000525441 DNMT3AQ9Y6K1 912 aaPredicted RBP17.25■□□□□ 0.35
NR1H3-228ENST00000525441 KIF26BQ2KJY2 2108 aa17.24■□□□□ 0.35
NR1H3-228ENST00000525441 CDRT15L2A8MXV6 281 aa17.24■□□□□ 0.35
NR1H3-228ENST00000525441 GPR39O43194 453 aa17.24■□□□□ 0.35
NR1H3-228ENST00000525441 LDB2O43679 373 aa17.24■□□□□ 0.35
NR1H3-228ENST00000525441 RALBP11234 206 aa17.24■□□□□ 0.35
NR1H3-228ENST00000525441 EPHA4P54764 986 aa17.24■□□□□ 0.35
NR1H3-228ENST00000525441 CCDC173Q0VFZ6 552 aa17.24■□□□□ 0.35
NR1H3-228ENST00000525441 TRA2AQ13595 282 aaKnown RBP eCLIP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms