RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 ALPIP09923 528 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 PTGS2P35354 604 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 MLLT3P42568 568 aaPredicted RBP16.91■□□□□ 0.3
BEST1-203ENST00000524877 SCRN3Q0VDG4 424 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 PACS1Q6VY07 963 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 LRRC34Q8IZ02 419 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 EIF1ADQ8N9N8 165 aaKnown RBP16.91■□□□□ 0.3
BEST1-203ENST00000524877 MRPL48Q96GC5 212 aaKnown RBP16.91■□□□□ 0.3
BEST1-203ENST00000524877 EIF2B3Q9NR50 452 aaKnown RBP16.91■□□□□ 0.3
BEST1-203ENST00000524877 ADPRHL2Q9NX46 363 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 NUDT4Q9NZJ9 180 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 IGSF9Q9P2J2 1179 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 FAM25AB3EWG3 89 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 FAM25CB3EWG5 89 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 FAM25GB3EWG6 89 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 ACP5P13686 325 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 RING1Q06587 406 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 EIF4HQ15056 248 aaKnown RBP16.91■□□□□ 0.3
BEST1-203ENST00000524877 LSM12Q3MHD2 195 aaKnown RBP16.91■□□□□ 0.3
BEST1-203ENST00000524877 GPR33Q49SQ1 333 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 BNC2Q6ZN30 1099 aaPredicted RBP16.91■□□□□ 0.3
BEST1-203ENST00000524877 PCDH19Q8TAB3 1148 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 AARSD1Q9BTE6 412 aaKnown RBP16.91■□□□□ 0.3
BEST1-203ENST00000524877 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.91■□□□□ 0.3
BEST1-203ENST00000524877 POLR1BQ9H9Y6 1135 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 DDX18Q9NVP1 670 aaKnown RBP16.91■□□□□ 0.3
BEST1-203ENST00000524877 ACVRL1P37023 503 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 CYP2U1Q7Z449 544 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 FAM46DQ8NEK8 389 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 RAB7BQ96AH8 199 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 C1orf74Q96LT6 269 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 FCRL5Q96RD9 977 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 SNX15Q9NRS6 342 aa16.91■□□□□ 0.3
BEST1-203ENST00000524877 C2orf78A6NCI8 922 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 GRXCR1A8MXD5 290 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 C9J4A7 227 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 GSTM1P09488 218 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 RABEPKQ7Z6M1 372 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 TRIM64CA6NLI5 447 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 MT-CYBP00156 380 aaPredicted RBP16.9■□□□□ 0.3
BEST1-203ENST00000524877 GSNP06396 782 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 EPORP19235 508 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 OGNP20774 298 aaKnown RBP16.9■□□□□ 0.3
BEST1-203ENST00000524877 RPS7P62081 194 aaKnown RBP16.9■□□□□ 0.3
BEST1-203ENST00000524877 PRKG2Q13237 762 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 ELOCQ15369 112 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 C16orf46Q6P387 395 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 FOXJ1Q92949 421 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 C3orf14Q9HBI5 128 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 TULP2O00295 520 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 ESR1P03372 595 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 PRKCGP05129 697 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 RPS21P63220 83 aaKnown RBP16.9■□□□□ 0.3
BEST1-203ENST00000524877 MPP5Q8N3R9 675 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 NKD2Q969F2 451 aaPredicted RBP16.9■□□□□ 0.3
BEST1-203ENST00000524877 RAD51AP1Q96B01 352 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 REXO5Q96IC2 774 aaKnown RBP16.9■□□□□ 0.3
BEST1-203ENST00000524877 GPR21Q99679 349 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 FAM83CQ9BQN1 747 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 CORO2BQ9UQ03 480 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 PTGESO14684 152 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 DRD1P21728 446 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 CSTF2P33240 577 aaKnown RBP eCLIP16.9■□□□□ 0.3
BEST1-203ENST00000524877 DEPDC1Q5TB30 811 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 C16orf62Q7Z3J2 963 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 MRPL43Q8N983 215 aaKnown RBP16.9■□□□□ 0.3
BEST1-203ENST00000524877 HDAC7Q8WUI4 952 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 ALG3Q92685 438 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 TTYH3Q9C0H2 523 aa16.9■□□□□ 0.3
BEST1-203ENST00000524877 KCNH1O95259 989 aa16.89■□□□□ 0.3
BEST1-203ENST00000524877 NRLP54845 237 aa16.89■□□□□ 0.3
BEST1-203ENST00000524877 STXBP1P61764 594 aaKnown RBP16.89■□□□□ 0.3
BEST1-203ENST00000524877 PROX1Q92786 737 aa16.89■□□□□ 0.3
BEST1-203ENST00000524877 INTS10Q9NVR2 710 aaKnown RBP16.89■□□□□ 0.3
BEST1-203ENST00000524877 DTLQ9NZJ0 730 aa16.89■□□□□ 0.3
BEST1-203ENST00000524877 GTPBP1O00178 669 aaKnown RBP16.89■□□□□ 0.29
BEST1-203ENST00000524877 ERAL1O75616 437 aaKnown RBP16.89■□□□□ 0.29
BEST1-203ENST00000524877 PIM1P11309 404 aaPredicted RBP16.89■□□□□ 0.29
BEST1-203ENST00000524877 PUDPQ08623 228 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 TJAP1Q5JTD0 557 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 ERN2Q76MJ5 926 aaKnown RBP16.89■□□□□ 0.29
BEST1-203ENST00000524877 PCDH12Q9NPG4 1184 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 CHRAC1Q9NRG0 131 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 PCDHGA4Q9Y5G9 962 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 GSRP00390 522 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 VIPR2P41587 438 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 CPA2P48052 419 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 CYP4F2P78329 520 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 PAPPAQ13219 1627 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 TCEAL5Q5H9L2 206 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 PEX5LQ8IYB4 626 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 CLEC4MQ9H2X3 399 aaPredicted RBP16.89■□□□□ 0.29
BEST1-203ENST00000524877 GALNT8Q9NY28 637 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 VPS4AQ9UN37 437 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 PGM3O95394 542 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 GABRB2P47870 512 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 PNLIPRP1P54315 467 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 HADHBP55084 474 aaKnown RBP16.89■□□□□ 0.29
BEST1-203ENST00000524877 ARMC3Q5W041 872 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 SMYD5Q6GMV2 418 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms