RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 PECAM1P16284 738 aaPredicted RBP3.11□□□□□ -1.91
CSDE1-208ENST00000524652 RFC2P35250 354 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 PBX3P40426 434 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 ACOT2P49753 483 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 ENTPD1P49961 510 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 RASSF2P50749 326 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 EFNA5P52803 228 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 STX17P56962 302 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 SLC37A1P57057 533 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 OSTNP61366 133 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 ROR2Q01974 943 aaKnown RBP3.11□□□□□ -1.91
CSDE1-208ENST00000524652 SPAG1Q07617 926 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 PPIGQ13427 754 aaKnown RBP eCLIP3.11□□□□□ -1.91
CSDE1-208ENST00000524652 TFDP1Q14186 410 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 CSHL1Q14406 222 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 MAPK6Q16659 721 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 KNOP1Q1ED39 458 aaKnown RBP3.11□□□□□ -1.91
CSDE1-208ENST00000524652 P3H1Q32P28 736 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 HSP90AA4PQ58FG1 418 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 XKR4Q5GH76 650 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 GLRA4Q5JXX5 417 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 Q5PR19 223 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 ANKRD40Q6AI12 368 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 TWF2Q6IBS0 349 aaKnown RBP3.11□□□□□ -1.91
CSDE1-208ENST00000524652 CENPPQ6IPU0 288 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 KLHL10Q6JEL2 608 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 TTI2Q6NXR4 508 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 MSANTD2Q6P1R3 559 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 NOTUMQ6P988 496 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 SLC27A1Q6PCB7 646 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 ALKAL1Q6UXT8 129 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 APTXQ7Z2E3 356 aaKnown RBP3.11□□□□□ -1.91
CSDE1-208ENST00000524652 TMEM173Q86WV6 379 aaPredicted RBP3.11□□□□□ -1.91
CSDE1-208ENST00000524652 ECHDC2Q86YB7 292 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 CBWD2Q8IUF1 395 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 ZBTB8OSQ8IWT0 167 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 EFCAB13Q8IY85 973 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 THNSL1Q8IYQ7 743 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 GUF1Q8N442 669 aaKnown RBP3.11□□□□□ -1.91
CSDE1-208ENST00000524652 USP38Q8NB14 1042 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 HERVK_113Q902F9 699 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 NPIPB3Q92617 1050 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 APBB2Q92870 758 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 TOP1MTQ969P6 601 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 ZNF689Q96CS4 500 aaPredicted RBP3.11□□□□□ -1.91
CSDE1-208ENST00000524652 HVCN1Q96D96 273 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 PHF21BQ96EK2 531 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 CASD1Q96PB1 797 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 ACCSQ96QU6 501 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 ABHD14AQ9BUJ0 271 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 APOL6Q9BWW8 343 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 CWH43Q9H720 699 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 MAP6D1Q9H9H5 199 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 AGPAT3Q9NRZ7 376 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 SIRT3Q9NTG7 399 aaPredicted RBP3.11□□□□□ -1.91
CSDE1-208ENST00000524652 DMAC2Q9NW81 257 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 CPSF3Q9UKF6 684 aaKnown RBP3.11□□□□□ -1.91
CSDE1-208ENST00000524652 TRAF3IP3Q9Y228 551 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 TNFSF13BQ9Y275 285 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 DOCK8Q8NF50 2099 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 UBE4BO95155 1302 aa3.11□□□□□ -1.91
CSDE1-208ENST00000524652 KIF26AQ9ULI4 1882 aaPredicted RBP3.11□□□□□ -1.91
CSDE1-208ENST00000524652 HELZP42694 1942 aaKnown RBP3.11□□□□□ -1.91
CSDE1-208ENST00000524652 DNAH14Q0VDD8 3507 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 LAMA1P25391 3075 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 ABHD14A-ACY1A0A1B0GW23 586 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 TTC26A0AVF1 554 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 ARL5CA6NH57 179 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 EPOPA6NHQ4 379 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 LRRIQ3A6PVS8 624 aaPredicted RBP3.1□□□□□ -1.91
CSDE1-208ENST00000524652 PODXLO00592 558 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 PDXKO00764 312 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 APOL1O14791 398 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 OGTO15294 1046 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 CLDN3O15551 220 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 AP5Z1O43299 807 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 TOM1L1O75674 476 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 AKAP3O75969 853 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 BAIAP3O94812 1187 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 SMC2O95347 1197 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 GJB5O95377 273 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 PARNO95453 639 aaKnown RBP3.1□□□□□ -1.91
CSDE1-208ENST00000524652 STAG3L1P0CL83 205 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 MCF2P10911 925 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 CCNE1P24864 410 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 AXLP30530 894 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 STT3AP46977 705 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 LIG4P49917 911 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 CYP2J2P51589 502 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 ZBTB6Q15916 424 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 SNRNP35Q16560 246 aaKnown RBP3.1□□□□□ -1.91
CSDE1-208ENST00000524652 MAPKAPK3Q16644 382 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 NFIL3Q16649 462 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 DCAF4L1Q3SXM0 396 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 ARHGAP15Q53QZ3 475 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 ZNF628Q5EBL2 1059 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 WASHC2DQ5SRD0 308 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 ARMCX5Q6P1M9 558 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 WDR93Q6P2C0 686 aa3.1□□□□□ -1.91
CSDE1-208ENST00000524652 PSRC1Q6PGN9 363 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms