RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 C3orf38Q5JPI3 329 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 LCE3BQ5TA77 95 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 ZNF658Q5TYW1 1059 aaPredicted RBP5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 SEL1L3Q68CR1 1132 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 OR6B2Q6IFH4 312 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 KLHL10Q6JEL2 608 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 FBXL22Q6P050 247 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 CRTC1Q6UUV9 634 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 PTAR1Q7Z6K3 402 aaPredicted RBP5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 ADGRE4PQ86SQ3 457 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 IQCHQ86VS3 1027 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 TRIM69Q86WT6 500 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 RHOT1Q8IXI2 618 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 PQLC1Q8N2U9 271 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 LILRA3Q8N6C8 439 aaPredicted RBP5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 ATP11CQ8NB49 1132 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 LSM14AQ8ND56 463 aaKnown RBP5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 OR52K2Q8NGK3 314 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 OR5M3Q8NGP4 307 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 OR4C6Q8NH72 309 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 SLC35G2Q8TBE7 412 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 MAPK15Q8TD08 544 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 RFFLQ8WZ73 363 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 ARRDC3Q96B67 414 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 VCPIP1Q96JH7 1222 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 APOLD1Q96LR9 279 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 ZNF578Q96N58 590 aaPredicted RBP5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 LRRC37BQ96QE4 947 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 TRIM62Q9BVG3 475 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 SEMA4CQ9C0C4 833 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 SIK2Q9H0K1 926 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 NELFAQ9H3P2 528 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 SYNDIG1Q9H7V2 258 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 MANSC1Q9H8J5 431 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 POPDC2Q9HBU9 364 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 ACP6Q9NPH0 428 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 ANLNQ9NQW6 1124 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 DYRK4Q9NR20 520 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 KLHL11Q9NVR0 708 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 GEMIN8Q9NWZ8 242 aaKnown RBP5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 DDIT4Q9NX09 232 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 TRPS1Q9UHF7 1281 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 IPO11Q9UI26 975 aaKnown RBP5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 VANGL2Q9ULK5 521 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 OAZ3Q9UMX2 235 aa5.34□□□□□ -1.55
CTNNA1-239ENST00000523685 SHROOM3Q8TF72 1996 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 COL5A1P20908 1838 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 A0A1W2PRX2 142 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 UBE2QL1A1L167 161 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 GOLGA6L4A6NEF3 574 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 NEMP2A6NFY4 417 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 CAPN8A6NHC0 703 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 C10orf142B7Z368 130 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 K7ERQ8 282 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 PSMA7O14818 248 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 MCF2LO15068 1137 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 MED7O43513 233 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 SNAP91O60641 907 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 PIAS2O75928 621 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 SMC2O95347 1197 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 ADCY5O95622 1261 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 CTSLP07711 333 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 RHOCP08134 193 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 SLC2A3P11169 496 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 CKMT1AP12532 417 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 HNRNPA2B1P22626 353 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 RRM1P23921 792 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 RBMS1P29558 406 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 CCR1P32246 355 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 CHRNA3P32297 505 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 NUDT1P36639 197 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 GPD2P43304 727 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 SLC6A9P48067 706 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 DUSP3P51452 185 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 DNA2P51530 1060 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 UCNP55089 124 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 TAS2R38P59533 333 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 RHDQ02161 417 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 LRRC63Q05C16 580 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 STIM1Q13586 685 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 RIN1Q13671 783 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 CDKN3Q16667 212 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 ZNF284Q2VY69 593 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 DEFB133Q30KQ1 61 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 ZSCAN23Q3MJ62 389 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 ZFYVE27Q5T4F4 411 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 PIP5KL1Q5T9C9 394 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 KIAA1614Q5VZ46 1190 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 LINGO4Q6UY18 593 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 Q6ZSR6 202 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 EFL1Q7Z2Z2 1120 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 TAX1BP1Q86VP1 789 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 HORMAD1Q86X24 394 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 CREBRFQ8IUR6 639 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 DEFB106AQ8N104 65 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 LSMEM2Q8N112 164 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 SLC22A18ASQ8N1D0 253 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 SH2D3CQ8N5H7 860 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 IFI44Q8TCB0 444 aa5.33□□□□□ -1.56
CTNNA1-239ENST00000523685 LMX1AQ8TE12 382 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms