RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 SPOUT1Q5T280 376 aaKnown RBP10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 TXNDC8Q6A555 127 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 OGFOD2Q6N063 350 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 TXNDC11Q6PKC3 985 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 FAM151BQ6UXP7 276 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 SATL1Q86VE3 508 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 APCDD1Q8J025 514 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 CDYL2Q8N8U2 506 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 OR2T34Q8NGX1 318 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 OR2T3Q8NH03 318 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 LRRC58Q96CX6 371 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 SLC29A1Q99808 456 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 CENPKQ9BS16 269 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 BOCQ9BWV1 1114 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 SPATA16Q9BXB7 569 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 NOL11Q9H8H0 719 aaKnown RBP10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 PAPOLBQ9NRJ5 636 aaKnown RBP10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 PKP3Q9Y446 797 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 GAPDHSO14556 408 aaPredicted RBP10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 PRRG1O14668 218 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 PFDN6O15212 129 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 MLYCDO95822 493 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 ESR1P03372 595 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 ITGB6P18564 788 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 ERVPABLB-1P60509 514 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 DEFB115Q30KQ5 88 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 AARS2Q5JTZ9 985 aaKnown RBP10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 GPRIN3Q6ZVF9 776 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 MINDY1Q8N5J2 469 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 OR56A4Q8NGH8 313 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 RIN3Q8TB24 985 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 LKAAEAR1Q8TD35 194 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 PIH1D2Q8WWB5 315 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 PBXIP1Q96AQ6 731 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 MYO19Q96H55 970 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 UHRF1Q96T88 793 aaPredicted RBP10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 CIB1Q99828 191 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 HOPXQ9BPY8 73 aaPredicted RBP10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 CFHR5Q9BXR6 569 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 NUSAP1Q9BXS6 441 aaKnown RBP10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 VPS4BO75351 444 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 BAIAP3O94812 1187 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 OR6B1O95007 311 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 HTR6P50406 440 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 CACNG1Q06432 222 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 CDH18Q13634 790 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 IKBKEQ14164 716 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 VEPH1Q14D04 833 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 PAGE3Q5JUK9 113 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 TPGS2Q68CL5 300 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 FAM117BQ6P1L5 589 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 LETMD1Q6P1Q0 360 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 IYDQ6PHW0 289 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 ZNF783Q6ZMS7 281 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 SPPL2CQ8IUH8 684 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 PIP4K2CQ8TBX8 421 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 HBEGFQ99075 208 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 SLC2A11Q9BYW1 496 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 HACD3Q9P035 362 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 DNMT3BQ9UBC3 853 aaKnown RBP10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 EVLQ9UI08 416 aaPredicted RBP10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 CNOT11Q9UKZ1 510 aaKnown RBP10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 CPQQ9Y646 472 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 SLC30A1Q9Y6M5 507 aa10.64□□□□□ -0.71
RAB11FIP1-204ENST00000522774 A0A1B0GTW7 788 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 GFRA2O00451 464 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 PRMT5O14744 637 aaPredicted RBP10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 PGLSO95336 258 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 SPATA31D3P0C874 917 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 HSPA8P11142 646 aaKnown RBP10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 CKMT2P17540 419 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 UGT1A6P19224 532 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 IL12AP29459 219 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 HMGCLP35914 325 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 ADARP55265 1226 aaKnown RBP10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 RCAN2Q14206 197 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 PABPC1LQ4VXU2 614 aaKnown RBP10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 RABL3Q5HYI8 236 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 ARMC12Q5T9G4 340 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 SPATA31D4Q6ZUB0 917 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 SPATA19Q7Z5L4 167 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 HJURPQ8NCD3 748 aaPredicted RBP10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 PLK2Q9NYY3 685 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 SLAMF8Q9P0V8 285 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 PCDH10Q9P2E7 1040 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 CLEC4EQ9ULY5 219 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 LZTS1Q9Y250 596 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 DHRS7Q9Y394 339 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 PCDHA9Q9Y5H5 950 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 CHEK2O96017 543 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 PABPC4LP0CB38 370 aaKnown RBP10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 ETS2P15036 469 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 SOX11P35716 441 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 HSPA13P48723 471 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 PRMT9Q6P2P2 845 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 SLC30A9Q6PML9 568 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 SBSNQ6UWP8 590 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 Q6ZNB5 142 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 Q6ZSR9 355 aa10.63□□□□□ -0.71
RAB11FIP1-204ENST00000522774 SERPINA9Q86WD7 417 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms