RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 APOC2P02655 101 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 GPR89BP0CG08 455 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 WT1P19544 449 aaPredicted RBP20.4■□□□□ 0.86
SDCBP-209ENST00000522243 MPP3Q13368 585 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 CHRNA6Q15825 494 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 FAM151BQ6UXP7 276 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 RAD9BQ6WBX8 426 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 GLT6D1Q7Z4J2 308 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 CCDC112Q8NEF3 446 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 WBP1Q96G27 269 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 MRFAP1L1Q96HT8 127 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 VPS35Q96QK1 796 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 FAM118BQ9BPY3 351 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.4■□□□□ 0.86
SDCBP-209ENST00000522243 B3GNT4Q9C0J1 378 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 IL26Q9NPH9 171 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 ZNF624Q9P2J8 865 aaPredicted RBP20.4■□□□□ 0.86
SDCBP-209ENST00000522243 PDP2Q9P2J9 529 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 TRIM10Q9UDY6 481 aa20.4■□□□□ 0.86
SDCBP-209ENST00000522243 REXO2Q9Y3B8 237 aaKnown RBP20.4■□□□□ 0.86
SDCBP-209ENST00000522243 UGT1A9O60656 530 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 AGTP01019 485 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 UGT1A6P19224 532 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 UGT1A1P22309 533 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 UGT1A4P22310 534 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 RPL10P27635 214 aaKnown RBP20.39■□□□□ 0.85
SDCBP-209ENST00000522243 CA5AP35218 305 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 CTNNA1P35221 906 aaKnown RBP20.39■□□□□ 0.85
SDCBP-209ENST00000522243 UGT1A3P35503 534 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 SPAM1P38567 509 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 SLC19A1P41440 591 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 EPHA4P54764 986 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 UBE2IP63279 158 aaKnown RBP20.39■□□□□ 0.85
SDCBP-209ENST00000522243 OTUD4Q01804 1114 aaKnown RBP20.39■□□□□ 0.85
SDCBP-209ENST00000522243 TMEM115Q12893 351 aaPredicted RBP20.39■□□□□ 0.85
SDCBP-209ENST00000522243 XRCC4Q13426 336 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 GTF2H3Q13889 308 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 PTPRCAPQ14761 206 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 ANKS6Q68DC2 871 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 AADACL2Q6P093 401 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 WDR74Q6RFH5 385 aaPredicted RBP20.39■□□□□ 0.85
SDCBP-209ENST00000522243 TMTC1Q8IUR5 882 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 ACRBPQ8NEB7 543 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 ACTL9Q8TC94 416 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 SGF29Q96ES7 293 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 CTRCQ99895 268 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 FICDQ9BVA6 458 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 FSD1LQ9BXM9 530 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 TRABDQ9H4I3 376 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 UGT1A7Q9HAW7 530 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 UGT1A10Q9HAW8 530 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 UGT1A8Q9HAW9 530 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 IL17CQ9P0M4 197 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 TRHDEQ9UKU6 1024 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 PCDHGA3Q9Y5H0 932 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 PCDHA3Q9Y5H8 950 aa20.39■□□□□ 0.85
SDCBP-209ENST00000522243 STMND1H3BQB6 276 aa20.38■□□□□ 0.85
SDCBP-209ENST00000522243 IPO7O95373 1038 aaKnown RBP20.38■□□□□ 0.85
SDCBP-209ENST00000522243 VIPP01282 170 aa20.38■□□□□ 0.85
SDCBP-209ENST00000522243 HLA-DPA1P20036 260 aa20.38■□□□□ 0.85
SDCBP-209ENST00000522243 DRG2P55039 364 aaKnown RBP20.38■□□□□ 0.85
SDCBP-209ENST00000522243 OLIG2Q13516 323 aa20.38■□□□□ 0.85
SDCBP-209ENST00000522243 ARHGAP22Q7Z5H3 698 aa20.38■□□□□ 0.85
SDCBP-209ENST00000522243 TRAPPC5Q8IUR0 188 aa20.38■□□□□ 0.85
SDCBP-209ENST00000522243 TRIM48Q8IWZ4 208 aa20.38■□□□□ 0.85
SDCBP-209ENST00000522243 TTC25Q96NG3 672 aa20.38■□□□□ 0.85
SDCBP-209ENST00000522243 GORASP1Q9BQQ3 440 aa20.38■□□□□ 0.85
SDCBP-209ENST00000522243 TIMM29Q9BSF4 260 aa20.38■□□□□ 0.85
SDCBP-209ENST00000522243 OSBPL8Q9BZF1 889 aa20.38■□□□□ 0.85
SDCBP-209ENST00000522243 LACRTQ9GZZ8 138 aa20.38■□□□□ 0.85
SDCBP-209ENST00000522243 GBA3Q9H227 469 aa20.38■□□□□ 0.85
SDCBP-209ENST00000522243 HACD3Q9P035 362 aa20.38■□□□□ 0.85
SDCBP-209ENST00000522243 GLYATL1P3A0A0U1RQE8 302 aa20.37■□□□□ 0.85
SDCBP-209ENST00000522243 B4E171 279 aa20.37■□□□□ 0.85
SDCBP-209ENST00000522243 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.37■□□□□ 0.85
SDCBP-209ENST00000522243 TYRP1P17643 537 aa20.37■□□□□ 0.85
SDCBP-209ENST00000522243 XRCC1P18887 633 aaPredicted RBP20.37■□□□□ 0.85
SDCBP-209ENST00000522243 FECHP22830 423 aa20.37■□□□□ 0.85
SDCBP-209ENST00000522243 CTNNA2P26232 953 aa20.37■□□□□ 0.85
SDCBP-209ENST00000522243 TSPAN7P41732 249 aa20.37■□□□□ 0.85
SDCBP-209ENST00000522243 GEMP55040 296 aa20.37■□□□□ 0.85
SDCBP-209ENST00000522243 COPS2P61201 443 aa20.37■□□□□ 0.85
SDCBP-209ENST00000522243 CYP4F2P78329 520 aa20.37■□□□□ 0.85
SDCBP-209ENST00000522243 TMEM26Q6ZUK4 368 aa20.37■□□□□ 0.85
SDCBP-209ENST00000522243 BMPERQ8N8U9 685 aa20.37■□□□□ 0.85
SDCBP-209ENST00000522243 NKD1Q969G9 470 aa20.37■□□□□ 0.85
SDCBP-209ENST00000522243 APOL2Q9BQE5 337 aa20.37■□□□□ 0.85
SDCBP-209ENST00000522243 DDA1Q9BW61 102 aa20.37■□□□□ 0.85
SDCBP-209ENST00000522243 PKP3Q9Y446 797 aa20.37■□□□□ 0.85
SDCBP-209ENST00000522243 PCDHGA4Q9Y5G9 962 aa20.37■□□□□ 0.85
SDCBP-209ENST00000522243 SLC30A1Q9Y6M5 507 aa20.37■□□□□ 0.85
SDCBP-209ENST00000522243 BAHCC1Q9P281 2608 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 AHCTF1Q8WYP5 2266 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 LILRA5A6NI73 299 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 PRR19A6NJB7 356 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 OR52A4PA6NMU1 304 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 PJA2O43164 708 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 RBP3P10745 1247 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 BRAFP15056 766 aa20.36■□□□□ 0.85
SDCBP-209ENST00000522243 IDSP22304 550 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms