RNA–Protein interactions for RNA: ENST00000515219.5

DDR1-277, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-277ENST00000515219 PRUNE1Q86TP1 453 aa17.14■□□□□ 0.33
DDR1-277ENST00000515219 ZNF761Q86XN6 746 aaPredicted RBP17.14■□□□□ 0.33
DDR1-277ENST00000515219 RASGEF1AQ8N9B8 481 aa17.14■□□□□ 0.33
DDR1-277ENST00000515219 ANP32BQ92688 251 aaKnown RBP17.14■□□□□ 0.33
DDR1-277ENST00000515219 FGF11Q92914 225 aa17.14■□□□□ 0.33
DDR1-277ENST00000515219 SLC38A3Q99624 504 aa17.14■□□□□ 0.33
DDR1-277ENST00000515219 TIMM29Q9BSF4 260 aa17.14■□□□□ 0.33
DDR1-277ENST00000515219 ETNK1Q9HBU6 452 aa17.14■□□□□ 0.33
DDR1-277ENST00000515219 SMOXQ9NWM0 555 aa17.14■□□□□ 0.33
DDR1-277ENST00000515219 PIH1D1Q9NWS0 290 aaKnown RBP17.14■□□□□ 0.33
DDR1-277ENST00000515219 DMXL2Q8TDJ6 3036 aa17.14■□□□□ 0.33
DDR1-277ENST00000515219 A6NCN8 305 aa17.13■□□□□ 0.33
DDR1-277ENST00000515219 OR5K4A6NMS3 321 aa17.13■□□□□ 0.33
DDR1-277ENST00000515219 PDZK1P1A8MUH7 402 aa17.13■□□□□ 0.33
DDR1-277ENST00000515219 E7EVH7 732 aa17.13■□□□□ 0.33
DDR1-277ENST00000515219 LDB2O43679 373 aa17.13■□□□□ 0.33
DDR1-277ENST00000515219 VCLP18206 1134 aa17.13■□□□□ 0.33
DDR1-277ENST00000515219 MSH3P20585 1137 aa17.13■□□□□ 0.33
DDR1-277ENST00000515219 CCKBRP32239 447 aa17.13■□□□□ 0.33
DDR1-277ENST00000515219 FDFT1P37268 417 aa17.13■□□□□ 0.33
DDR1-277ENST00000515219 HADHAP40939 763 aa17.13■□□□□ 0.33
DDR1-277ENST00000515219 ZNF140P52738 457 aaPredicted RBP17.13■□□□□ 0.33
DDR1-277ENST00000515219 NFATC2Q13469 925 aa17.13■□□□□ 0.33
DDR1-277ENST00000515219 POU6F1Q14863 301 aa17.13■□□□□ 0.33
DDR1-277ENST00000515219 SEPT7Q16181 437 aaKnown RBP17.13■□□□□ 0.33
DDR1-277ENST00000515219 LONRF2Q1L5Z9 754 aa17.13■□□□□ 0.33
DDR1-277ENST00000515219 NKAIN2Q5VXU1 208 aa17.13■□□□□ 0.33
DDR1-277ENST00000515219 LINC00523Q86TU6 105 aa17.13■□□□□ 0.33
DDR1-277ENST00000515219 SLC9B2Q86UD5 537 aa17.13■□□□□ 0.33
DDR1-277ENST00000515219 LIN37Q96GY3 246 aaPredicted RBP17.13■□□□□ 0.33
DDR1-277ENST00000515219 AHCYL2Q96HN2 611 aaKnown RBP17.13■□□□□ 0.33
DDR1-277ENST00000515219 ZNF578Q96N58 590 aaPredicted RBP17.13■□□□□ 0.33
DDR1-277ENST00000515219 ZMYND15Q9H091 742 aa17.13■□□□□ 0.33
DDR1-277ENST00000515219 SARS2Q9NP81 518 aaKnown RBP17.13■□□□□ 0.33
DDR1-277ENST00000515219 CRLS1Q9UJA2 301 aa17.13■□□□□ 0.33
DDR1-277ENST00000515219 PCDHGA8Q9Y5G5 932 aa17.13■□□□□ 0.33
DDR1-277ENST00000515219 KMT2BQ9UMN6 2715 aaPredicted RBP17.13■□□□□ 0.33
DDR1-277ENST00000515219 BPTFQ12830 3046 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 IGHV1OR21-1A0A087WYE8 117 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 KIR2DS5A0A0G2JLQ3 304 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 A0A0G2JNG1 304 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 PMS2P1A4D2B8 440 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 OR2AG2A6NM03 316 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 ERI2A8K979 691 aaKnown RBP17.12■□□□□ 0.33
DDR1-277ENST00000515219 KIR2DS3K7RE56 304 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 AGRPO00253 132 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 CCL22O00626 93 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 DXOO77932 396 aaKnown RBP17.12■□□□□ 0.33
DDR1-277ENST00000515219 ITGALP20701 1170 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 CD1CP29017 333 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 CTSCP53634 463 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 XIAPP98170 497 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 ZFP36L1Q07352 338 aaKnown RBP17.12■□□□□ 0.33
DDR1-277ENST00000515219 EIF3IQ13347 325 aaKnown RBP17.12■□□□□ 0.33
DDR1-277ENST00000515219 KIR2DS5Q14953 304 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.12■□□□□ 0.33
DDR1-277ENST00000515219 PHF19Q5T6S3 580 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 TMEM220Q6QAJ8 160 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 C19orf48Q6RUI8 117 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 PPP1R21Q6ZMI0 780 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 RAB11FIP2Q7L804 512 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 TMPRSS9Q7Z410 1059 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 FBXO39Q8N4B4 442 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 DNAAF3Q8N9W5 541 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 OR52K1Q8NGK4 314 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 SNIP1Q8TAD8 396 aaKnown RBP17.12■□□□□ 0.33
DDR1-277ENST00000515219 HNRNPLLQ8WVV9 542 aaKnown RBP17.12■□□□□ 0.33
DDR1-277ENST00000515219 SH3KBP1Q96B97 665 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 DNAJC1Q96KC8 554 aaKnown RBP17.12■□□□□ 0.33
DDR1-277ENST00000515219 NUDT22Q9BRQ3 303 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 SEMA6CQ9H3T2 930 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 FAM96AQ9H5X1 160 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 RAB6BQ9NRW1 208 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 THSD1Q9NS62 852 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 PAK5Q9P286 719 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 ZKSCAN5Q9Y2L8 839 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 SLC30A1Q9Y6M5 507 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 EPG5Q9HCE0 2579 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 CACNA1BQ00975 2339 aa17.12■□□□□ 0.33
DDR1-277ENST00000515219 PLD2O14939 933 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 RRP8O43159 456 aaKnown RBP17.11■□□□□ 0.33
DDR1-277ENST00000515219 POP7O75817 140 aaKnown RBP17.11■□□□□ 0.33
DDR1-277ENST00000515219 TNFSF15O95150 251 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 GAS8O95995 478 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 ZSCAN5DPP0CG00 497 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 IDSP22304 550 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 RPL10P27635 214 aaKnown RBP17.11■□□□□ 0.33
DDR1-277ENST00000515219 PBLDP30039 288 aaPredicted RBP17.11■□□□□ 0.33
DDR1-277ENST00000515219 MC4RP32245 332 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 EIF2S3P41091 472 aaKnown RBP17.11■□□□□ 0.33
DDR1-277ENST00000515219 ERVPABLB-1P60509 514 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 CLPPQ16740 277 aaPredicted RBP17.11■□□□□ 0.33
DDR1-277ENST00000515219 FNBP1LQ5T0N5 605 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 DRICH1Q6PGQ1 229 aaPredicted RBP17.11■□□□□ 0.33
DDR1-277ENST00000515219 LRRC69Q6ZNQ3 347 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 DET1Q7L5Y6 550 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 GSTA5Q7RTV2 222 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 C11orf96Q7Z7L8 435 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 AMZ2Q86W34 360 aa17.11■□□□□ 0.33
DDR1-277ENST00000515219 SLITRK4Q8IW52 837 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms