RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 BRSK1Q8TDC3 778 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 LRRC45Q96CN5 670 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 HES6Q96HZ4 224 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 CCDC74BQ96LY2 380 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 DPYSL5Q9BPU6 564 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 TIMM29Q9BSF4 260 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 TSGA10Q9BZW7 698 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 PRDM8Q9NQV8 689 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.16■■□□□ 1.46
SNF8-213ENST00000514929 SLC23A2Q9UGH3 650 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 DNAJC16Q9Y2G8 782 aa24.16■■□□□ 1.46
SNF8-213ENST00000514929 C2orf81A6NN90 581 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 UGT1A9O60656 530 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 HOXB3P14651 431 aaPredicted RBP24.15■■□□□ 1.46
SNF8-213ENST00000514929 UGT1A6P19224 532 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 UGT1A1P22309 533 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 UGT1A4P22310 534 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 ADRA1AP35348 466 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 UGT1A3P35503 534 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 LIMK2P53671 638 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 MAPK10P53779 464 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 UCNP55089 124 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 CXADRP78310 365 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 SQSTM1Q13501 440 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 OLIG2Q13516 323 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 ITGA9Q13797 1035 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 TRAPPC5Q8IUR0 188 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 AVL9Q8NBF6 648 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 RCBTB1Q8NDN9 531 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 OR4D9Q8NGE8 314 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 ZCCHC2Q9C0B9 1178 aaKnown RBP24.15■■□□□ 1.46
SNF8-213ENST00000514929 UGT1A7Q9HAW7 530 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 UGT1A10Q9HAW8 530 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 UGT1A8Q9HAW9 530 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 ARL5AQ9Y689 179 aa24.15■■□□□ 1.46
SNF8-213ENST00000514929 C5orf60A6NFR6 353 aa24.14■■□□□ 1.45
SNF8-213ENST00000514929 KRT86O43790 486 aa24.14■■□□□ 1.45
SNF8-213ENST00000514929 DUX1O43812 170 aa24.14■■□□□ 1.45
SNF8-213ENST00000514929 LPOP22079 712 aaPredicted RBP24.14■■□□□ 1.45
SNF8-213ENST00000514929 CSF2RBP32927 897 aa24.14■■□□□ 1.45
SNF8-213ENST00000514929 TMPRSS3P57727 454 aa24.14■■□□□ 1.45
SNF8-213ENST00000514929 KLF1Q13351 362 aaPredicted RBP24.14■■□□□ 1.45
SNF8-213ENST00000514929 PTPRCAPQ14761 206 aa24.14■■□□□ 1.45
SNF8-213ENST00000514929 TAF1AQ15573 450 aaPredicted RBP24.14■■□□□ 1.45
SNF8-213ENST00000514929 LDLRAP1Q5SW96 308 aa24.14■■□□□ 1.45
SNF8-213ENST00000514929 ARHGEF18Q6ZSZ5 1173 aa24.14■■□□□ 1.45
SNF8-213ENST00000514929 ZNF547Q8IVP9 402 aa24.14■■□□□ 1.45
SNF8-213ENST00000514929 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.14■■□□□ 1.45
SNF8-213ENST00000514929 WDR70Q9NW82 654 aa24.14■■□□□ 1.45
SNF8-213ENST00000514929 CPNE7Q9UBL6 633 aa24.14■■□□□ 1.45
SNF8-213ENST00000514929 GUCA1BQ9UMX6 200 aa24.14■■□□□ 1.45
SNF8-213ENST00000514929 PDZK1P1A8MUH7 402 aa24.13■■□□□ 1.45
SNF8-213ENST00000514929 HGSO14964 777 aaPredicted RBP24.13■■□□□ 1.45
SNF8-213ENST00000514929 GPR39O43194 453 aa24.13■■□□□ 1.45
SNF8-213ENST00000514929 VCLP18206 1134 aa24.13■■□□□ 1.45
SNF8-213ENST00000514929 MPSTP25325 297 aa24.13■■□□□ 1.45
SNF8-213ENST00000514929 ETV5P41161 510 aa24.13■■□□□ 1.45
SNF8-213ENST00000514929 TRA2AQ13595 282 aaKnown RBP eCLIP24.13■■□□□ 1.455e-7■■■■■ 28.8
SNF8-213ENST00000514929 TMEM71Q6P5X7 295 aa24.13■■□□□ 1.45
SNF8-213ENST00000514929 GPR155Q7Z3F1 870 aa24.13■■□□□ 1.45
SNF8-213ENST00000514929 FAM71DQ8N9W8 422 aa24.13■■□□□ 1.45
SNF8-213ENST00000514929 TBL1YQ9BQ87 522 aa24.13■■□□□ 1.45
SNF8-213ENST00000514929 R3HDM2Q9Y2K5 976 aaKnown RBP24.13■■□□□ 1.45
SNF8-213ENST00000514929 NVLO15381 856 aaKnown RBP24.12■■□□□ 1.45
SNF8-213ENST00000514929 ARHGAP6O43182 974 aa24.12■■□□□ 1.45
SNF8-213ENST00000514929 PRAMEF1O95521 474 aa24.12■■□□□ 1.45
SNF8-213ENST00000514929 CRTAMO95727 393 aa24.12■■□□□ 1.45
SNF8-213ENST00000514929 MAPK9P45984 424 aa24.12■■□□□ 1.45
SNF8-213ENST00000514929 CFHR1Q03591 330 aa24.12■■□□□ 1.45
SNF8-213ENST00000514929 SEPT7Q16181 437 aaKnown RBP24.12■■□□□ 1.45
SNF8-213ENST00000514929 GPRC6AQ5T6X5 926 aa24.12■■□□□ 1.45
SNF8-213ENST00000514929 SEL1L2Q5TEA6 688 aa24.12■■□□□ 1.45
SNF8-213ENST00000514929 TRIM48Q8IWZ4 208 aa24.12■■□□□ 1.45
SNF8-213ENST00000514929 DDHD1Q8NEL9 900 aa24.12■■□□□ 1.45
SNF8-213ENST00000514929 OR4K2Q8NGD2 314 aa24.12■■□□□ 1.45
SNF8-213ENST00000514929 ZNF398Q8TD17 642 aa24.12■■□□□ 1.45
SNF8-213ENST00000514929 USP7Q93009 1102 aa24.12■■□□□ 1.45
SNF8-213ENST00000514929 CPNE5Q9HCH3 593 aa24.12■■□□□ 1.45
SNF8-213ENST00000514929 TMEM9Q9P0T7 183 aa24.12■■□□□ 1.45
SNF8-213ENST00000514929 TCRBV7S2A1N4TA0A589 114 aa24.11■■□□□ 1.45
SNF8-213ENST00000514929 GAPDHSO14556 408 aaPredicted RBP24.11■■□□□ 1.45
SNF8-213ENST00000514929 THRAP10827 490 aa24.11■■□□□ 1.45
SNF8-213ENST00000514929 IDSP22304 550 aa24.11■■□□□ 1.45
SNF8-213ENST00000514929 CSTF2P33240 577 aaKnown RBP eCLIP24.11■■□□□ 1.45
SNF8-213ENST00000514929 EPHA4P54764 986 aa24.11■■□□□ 1.45
SNF8-213ENST00000514929 PDE1BQ01064 536 aa24.11■■□□□ 1.45
SNF8-213ENST00000514929 CLN3Q13286 438 aa24.11■■□□□ 1.45
SNF8-213ENST00000514929 SPARCL1Q14515 664 aa24.11■■□□□ 1.45
SNF8-213ENST00000514929 PARP6Q2NL67 630 aa24.11■■□□□ 1.45
SNF8-213ENST00000514929 TMEM164Q5U3C3 297 aa24.11■■□□□ 1.45
SNF8-213ENST00000514929 AGBL5Q8NDL9 886 aa24.11■■□□□ 1.45
SNF8-213ENST00000514929 CCDC112Q8NEF3 446 aa24.11■■□□□ 1.45
SNF8-213ENST00000514929 SLC35B2Q8TB61 432 aa24.11■■□□□ 1.45
SNF8-213ENST00000514929 NCSTNQ92542 709 aa24.11■■□□□ 1.45
SNF8-213ENST00000514929 SMOXQ9NWM0 555 aa24.11■■□□□ 1.45
SNF8-213ENST00000514929 SCHIP1Q9P0W5 487 aaPredicted RBP24.11■■□□□ 1.45
SNF8-213ENST00000514929 PRAMEF33A0A0G2JMD5 474 aa24.1■■□□□ 1.45
SNF8-213ENST00000514929 PRAMEF10O60809 474 aa24.1■■□□□ 1.45
SNF8-213ENST00000514929 VIPP01282 170 aa24.1■■□□□ 1.45
SNF8-213ENST00000514929 CCL4P13236 92 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms