RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 PITRM1Q5JRX3 1037 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 MPP7Q5T2T1 576 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 TBC1D3GQ6DHY5 549 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 AWAT2Q6E213 333 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 TBC1D3CQ6IPX1 549 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 NEK5Q6P3R8 708 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 RAB11FIP2Q7L804 512 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 ZNF720Q7Z2F6 126 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 DSG4Q86SJ6 1040 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 ADIPOR2Q86V24 386 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 BRSK2Q8IWQ3 736 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 FAM217AQ8IXS0 508 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 SAMD14Q8IZD0 417 aaPredicted RBP3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 TBC1D3Q8IZP1 549 aaPredicted RBP3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 FBXO39Q8N4B4 442 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 OR6B3Q8NGW1 331 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 SCAMP5Q8TAC9 235 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 SLC35B2Q8TB61 432 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 IFI44Q8TCB0 444 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 GANCQ8TET4 914 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 DDI1Q8WTU0 396 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 POMGNT1Q8WZA1 660 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 NAT6Q93015 286 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 FAM131CQ96AQ9 280 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 TMA16Q96EY4 203 aaKnown RBP3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 ANKRD36BP1Q96IX9 119 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 TNIP3Q96KP6 325 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 KCNK16Q96T55 309 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 ZSWIM1Q9BR11 485 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 FUCA2Q9BTY2 467 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 B3GNT5Q9BYG0 378 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 STRADBQ9C0K7 418 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 CDH19Q9H159 772 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 FOXP1Q9H334 677 aaPredicted RBP3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 CSNK1G1Q9HCP0 422 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 DMAP1Q9NPF5 467 aaPredicted RBP3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 INTS13Q9NVM9 706 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 MKS1Q9NXB0 559 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 VPS4AQ9UN37 437 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 EXOC7Q9UPT5 735 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 SCML2Q9UQR0 700 aa3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 TDRD6O60522 2096 aaKnown RBP3.75□□□□□ -1.81
PDLIM5-218ENST00000513341 OTOGQ6ZRI0 2925 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 KIF26BQ2KJY2 2108 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 FBN3Q75N90 2809 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 LY6G6EA0A0G2JKS1 128 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 K7ENM7 598 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 HCRTO43612 131 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 TMEM127O75204 238 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 REC8O95072 547 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 CTDNEP1O95476 244 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 GPANK1O95872 356 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 TNNC2P02585 160 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 KLKB1P03952 638 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 S100BP04271 92 aaPredicted RBP3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 SRPRAP08240 638 aaKnown RBP3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 MYBL2P10244 700 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 RALAP11233 206 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 RARGP13631 454 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 POLR2EP19388 210 aaKnown RBP3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 TRIM21P19474 475 aaKnown RBP3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 CCND1P24385 295 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 HLA-FP30511 346 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 ATICP31939 592 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 UGT1A5P35504 534 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 DCTP40126 519 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 EPHB1P54762 984 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 POLE2P56282 527 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 CCDC15Q0P6D6 951 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 ANKRD1Q15327 319 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 TGIF1Q15583 401 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 ETFDHQ16134 617 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 CT83Q5H943 113 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 PGM2L1Q6PCE3 622 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 PAQR9Q6ZVX9 377 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 MED25Q71SY5 747 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 CHST9Q7L1S5 443 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 RSRC2Q7L4I2 434 aaKnown RBP3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 ZBTB46Q86UZ6 589 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 TRIM69Q86WT6 500 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 HEATR4Q86WZ0 1026 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 CACUL1Q86Y37 369 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 ZDHHC17Q8IUH5 632 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 RAVER1Q8IY67 606 aaKnown RBP3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 COL27A1Q8IZC6 1860 aaPredicted RBP3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 CRYBG2Q8N1P7 616 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 B3GALNT2Q8NCR0 500 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 C1orf162Q8NEQ5 155 aaPredicted RBP3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 OR6C4Q8NGE1 309 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 C9orf43Q8TAL5 461 aaPredicted RBP3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 FATE1Q969F0 183 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 GTF3C6Q969F1 213 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 TTC17Q96AE7 1141 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 SMARCD1Q96GM5 515 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 FIZ1Q96SL8 496 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 REEP2Q9BRK0 252 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 MMTAG2Q9BU76 263 aaKnown RBP3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 STRA6Q9BX79 667 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms