RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 METTL2AQ96IZ6 378 aaKnown RBP4.27□□□□□ -1.73
HTT-210ENST00000512909 FAM84BQ96KN1 310 aaPredicted RBP4.27□□□□□ -1.73
HTT-210ENST00000512909 C1orf74Q96LT6 269 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 LRFN5Q96NI6 719 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 PA2G4Q9UQ80 394 aaKnown RBP4.27□□□□□ -1.73
HTT-210ENST00000512909 TNNQ9UQP3 1299 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 CEPT1Q9Y6K0 416 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 NUP98P52948 1817 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 KIF13BQ9NQT8 1826 aa4.27□□□□□ -1.73
HTT-210ENST00000512909 NRXN2Q9P2S2 1712 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 ANKRD31Q8N7Z5 1873 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 PASKQ96RG2 1323 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 A0A0U1RQF3 1178 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 FAM237AA0A1B0GTK4 181 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 H3BQ06 376 aaPredicted RBP4.26□□□□□ -1.73
HTT-210ENST00000512909 SCAMP1O15126 338 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 DOK2O60496 412 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 PTP4A3O75365 173 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 VNN2O95498 520 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 CH25HO95992 272 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 LDHCP07864 332 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 DDX5P17844 614 aaKnown RBP4.26□□□□□ -1.73
HTT-210ENST00000512909 GCH1P30793 250 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 SHMT1P34896 483 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 EFNA5P52803 228 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 RAD23BP54727 409 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 TIMM10P62072 90 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 CEBPZQ03701 1054 aaKnown RBP4.26□□□□□ -1.73
HTT-210ENST00000512909 TFCP2Q12800 502 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 AIMP2Q13155 320 aaKnown RBP4.26□□□□□ -1.73
HTT-210ENST00000512909 SHBQ15464 509 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 GPATCH4Q5T3I0 446 aaKnown RBP4.26□□□□□ -1.73
HTT-210ENST00000512909 GKAP1Q5VSY0 366 aaPredicted RBP4.26□□□□□ -1.73
HTT-210ENST00000512909 FAM205BPQ63HN1 556 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 RGMBQ6NW40 437 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 PDXDC1Q6P996 788 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 FBXO46Q6PJ61 603 aaPredicted RBP4.26□□□□□ -1.73
HTT-210ENST00000512909 MOB2Q70IA6 237 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 CHST9Q7L1S5 443 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 ARMC9Q7Z3E5 817 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 CACNA2D4Q7Z3S7 1137 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 NOXA1Q86UR1 476 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 HAPLN4Q86UW8 402 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 MCUQ8NE86 351 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 ARRDC2Q8TBH0 407 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 NTN5Q8WTR8 489 aaPredicted RBP4.26□□□□□ -1.73
HTT-210ENST00000512909 ARHGAP45Q92619 1136 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 ERGIC1Q969X5 290 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 RRNAD1Q96FB5 475 aaKnown RBP4.26□□□□□ -1.73
HTT-210ENST00000512909 PRMT6Q96LA8 375 aaPredicted RBP4.26□□□□□ -1.73
HTT-210ENST00000512909 OR1F2PQ96R84 312 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 MEIS3Q99687 375 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 NTPCRQ9BSD7 190 aaKnown RBP4.26□□□□□ -1.73
HTT-210ENST00000512909 PLEKHA4Q9H4M7 779 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 TDRD3Q9H7E2 651 aaKnown RBP4.26□□□□□ -1.73
HTT-210ENST00000512909 POLR1BQ9H9Y6 1135 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 CWC15Q9P013 229 aaKnown RBP4.26□□□□□ -1.73
HTT-210ENST00000512909 CDC14AQ9UNH5 594 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 PCDHAC2Q9Y5I4 1007 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 PTGDR2Q9Y5Y4 395 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 RIC1Q4ADV7 1423 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 KIAA1551Q9HCM1 1747 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 RTL9Q8NET4 1388 aa4.26□□□□□ -1.73
HTT-210ENST00000512909 MYO3BQ8WXR4 1341 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 KIF16BQ96L93 1317 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 LAMB4A4D0S4 1761 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 LY6G6EA0A0G2JKS1 128 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 FIBPO43427 364 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 LDB2O43679 373 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 ZIC3O60481 467 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 SURF6O75683 361 aaKnown RBP4.25□□□□□ -1.73
HTT-210ENST00000512909 HIST1H2ABP04908 130 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 SRPRAP08240 638 aaKnown RBP4.25□□□□□ -1.73
HTT-210ENST00000512909 ACTN1P12814 892 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 HIST1H2ADP20671 130 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 AGAP20933 346 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 MAP2K2P36507 400 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 PIGAP37287 484 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 THPOP40225 353 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 IL15P40933 162 aaPredicted RBP4.25□□□□□ -1.73
HTT-210ENST00000512909 RFX2P48378 723 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 PMS2P54278 862 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 CREB5Q02930 508 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 TCP10Q12799 353 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 PLCB4Q15147 1175 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 ADIPOQQ15848 244 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 ZNF284Q2VY69 593 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 MMEL1Q495T6 779 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 C11orf87Q6NUJ2 197 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 KCTD18Q6PI47 426 aaPredicted RBP4.25□□□□□ -1.73
HTT-210ENST00000512909 GLDNQ6ZMI3 551 aaPredicted RBP4.25□□□□□ -1.73
HTT-210ENST00000512909 KRBA2Q6ZNG9 492 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 Q6ZSV7 163 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 HIST3H2AQ7L7L0 130 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 ZC3HC1Q86WB0 502 aaKnown RBP4.25□□□□□ -1.73
HTT-210ENST00000512909 ZNF575Q86XF7 245 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 HACE1Q8IYU2 909 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 ADGRF2Q8IZF7 708 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 FBXL14Q8N1E6 418 aa4.25□□□□□ -1.73
HTT-210ENST00000512909 WDTC1Q8N5D0 677 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms