RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 SPATS2LQ9NUQ6 558 aaKnown RBP7.15□□□□□ -1.26
USP46-208ENST00000512656 RCOR3Q9P2K3 495 aaPredicted RBP7.15□□□□□ -1.26
USP46-208ENST00000512656 IP6K2Q9UHH9 426 aa7.15□□□□□ -1.26
USP46-208ENST00000512656 SUFUQ9UMX1 484 aa7.15□□□□□ -1.26
USP46-208ENST00000512656 SLC17A4Q9Y2C5 497 aa7.15□□□□□ -1.26
USP46-208ENST00000512656 COL27A1Q8IZC6 1860 aaPredicted RBP7.15□□□□□ -1.27
USP46-208ENST00000512656 PTPN13Q12923 2485 aa7.15□□□□□ -1.27
USP46-208ENST00000512656 NPIPB15A6NHN6 443 aaPredicted RBP7.14□□□□□ -1.27
USP46-208ENST00000512656 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.14□□□□□ -1.27
USP46-208ENST00000512656 STMND1H3BQB6 276 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 MYO1FO00160 1098 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 B4GAT1O43505 415 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 SLC28A2O43868 658 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 PEX11BO96011 259 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 ZNF30P17039 623 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 ITIH1P19827 911 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 IL1R2P27930 398 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 CSTF2P33240 577 aaKnown RBP eCLIP7.14□□□□□ -1.27
USP46-208ENST00000512656 ADCY8P40145 1251 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 ACTR1BP42025 376 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 SSR1P43307 286 aaKnown RBP7.14□□□□□ -1.27
USP46-208ENST00000512656 PPM1FP49593 454 aaPredicted RBP7.14□□□□□ -1.27
USP46-208ENST00000512656 ZNF165P49910 485 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 MAZP56270 477 aaKnown RBP7.14□□□□□ -1.27
USP46-208ENST00000512656 ACTR1AP61163 376 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 MAXP61244 160 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 ITKQ08881 620 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 TRAF2Q12933 501 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 SQSTM1Q13501 440 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 C16orf72Q14CZ0 275 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 TGIF1Q15583 401 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 HADHQ16836 314 aaKnown RBP7.14□□□□□ -1.27
USP46-208ENST00000512656 CYP27C1Q4G0S4 372 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 CCDC122Q5T0U0 273 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 TIGD7Q6NT04 549 aaPredicted RBP7.14□□□□□ -1.27
USP46-208ENST00000512656 SLC30A9Q6PML9 568 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 ZNF765Q7L2R6 523 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 HSD11B1LQ7Z5J1 315 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 NRROSQ86YC3 692 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 GALNT13Q8IUC8 556 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 MAP7D3Q8IWC1 876 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 TP53INP2Q8IXH6 220 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 RAVER1Q8IY67 606 aaKnown RBP7.14□□□□□ -1.27
USP46-208ENST00000512656 NRSN1Q8IZ57 195 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 OR4D9Q8NGE8 314 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 SYN2Q92777 582 aaPredicted RBP7.14□□□□□ -1.27
USP46-208ENST00000512656 AP2M1Q96CW1 435 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 AHCYL2Q96HN2 611 aaKnown RBP7.14□□□□□ -1.27
USP46-208ENST00000512656 NSMCE3Q96MG7 304 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 OR2M4Q96R27 311 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 TAAR9Q96RI9 348 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 SEMA3CQ99985 751 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 ASPSCR1Q9BZE9 553 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 STN1Q9H668 368 aaKnown RBP7.14□□□□□ -1.27
USP46-208ENST00000512656 RDH14Q9HBH5 336 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 PCDH18Q9HCL0 1135 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 NT5MQ9NPB1 228 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 ETNK2Q9NVF9 386 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 CRIM1Q9NZV1 1036 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 AMACRQ9UHK6 382 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 ANAPC7Q9UJX3 599 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 PPIL1Q9Y3C6 166 aa7.14□□□□□ -1.27
USP46-208ENST00000512656 LRRK1Q38SD2 2015 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 IGHV1OR21-1A0A087WYE8 117 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 IGHV5-10-1A0A0J9YXX1 117 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 A0A0J9YYE9 177 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 A0A1W2PQJ5 194 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 AGRPO00253 132 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 MATN3O15232 486 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 TMPRSS2O15393 492 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 ASMTLO95671 621 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 TRBC1P01850 177 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 SERPING1P05155 500 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 SKILP12757 684 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 SLC2A4P14672 509 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 CTPS1P17812 591 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 LHCGRP22888 699 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 AK4P27144 223 aaPredicted RBP7.13□□□□□ -1.27
USP46-208ENST00000512656 CD1CP29017 333 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 MAN1A1P33908 653 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 ETV5P41161 510 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 NOP2P46087 812 aaKnown RBP7.13□□□□□ -1.27
USP46-208ENST00000512656 POLD2P49005 469 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 LIMK2P53671 638 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 RPL26P61254 145 aaKnown RBP7.13□□□□□ -1.27
USP46-208ENST00000512656 IFI16Q16666 785 aaKnown RBP7.13□□□□□ -1.27
USP46-208ENST00000512656 E4F1Q66K89 784 aaPredicted RBP7.13□□□□□ -1.27
USP46-208ENST00000512656 LRRC66Q68CR7 880 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 DOK6Q6PKX4 331 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 TECPR1Q7Z6L1 1165 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 TSPAN33Q86UF1 283 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 ZFAND4Q86XD8 727 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 SFTPA2Q8IWL1 248 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 PELI3Q8N2H9 469 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 PGBD5Q8N414 524 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 TEX26Q8N6G2 289 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 OR10G6Q8NH81 332 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 EXD1Q8NHP7 514 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 PIH1D2Q8WWB5 315 aa7.13□□□□□ -1.27
USP46-208ENST00000512656 SH3KBP1Q96B97 665 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms