RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 ERRFI1Q9UJM3 462 aaPredicted RBP3.2□□□□□ -1.9
OTUD4-207ENST00000509517 POU2F3Q9UKI9 436 aa3.2□□□□□ -1.9
OTUD4-207ENST00000509517 ICAM5Q9UMF0 924 aa3.2□□□□□ -1.9
OTUD4-207ENST00000509517 ZNF711Q9Y462 761 aa3.2□□□□□ -1.9
OTUD4-207ENST00000509517 LAS1LQ9Y4W2 734 aaKnown RBP3.2□□□□□ -1.9
OTUD4-207ENST00000509517 A0A1W2PS18 150 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 FSD2A1L4K1 749 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 A6NCN8 305 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 CDRT15L2A8MXV6 281 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 PTGES3LE9PB15 166 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 BMPR1BO00238 502 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 ZNHIT1O43257 154 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 WDR1O75083 606 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 TPPPO94811 219 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 CLTBP09497 229 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 FAM106CPP0CH98 169 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 PON1P27169 355 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 PSMB10P40306 273 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 IL15P40933 162 aaPredicted RBP3.19□□□□□ -1.9
OTUD4-207ENST00000509517 MSH2P43246 934 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 DRG2P55039 364 aaKnown RBP3.19□□□□□ -1.9
OTUD4-207ENST00000509517 PITX1P78337 314 aaPredicted RBP3.19□□□□□ -1.9
OTUD4-207ENST00000509517 COG7P83436 770 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 ARL16Q0P5N6 197 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 IKQ13123 557 aaPredicted RBP3.19□□□□□ -1.9
OTUD4-207ENST00000509517 AIMP2Q13155 320 aaKnown RBP3.19□□□□□ -1.9
OTUD4-207ENST00000509517 IRF3Q14653 427 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 TMEM35AQ53FP2 167 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 RARS2Q5T160 578 aaKnown RBP3.19□□□□□ -1.9
OTUD4-207ENST00000509517 FAM205BPQ63HN1 556 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 RAD9BQ6WBX8 426 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 ZNF704Q6ZNC4 412 aaPredicted RBP3.19□□□□□ -1.9
OTUD4-207ENST00000509517 Q75L30 129 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 DSG4Q86SJ6 1040 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 SMIM29Q86T20 159 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 ZNF329Q86UD4 541 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 CCDC190Q86UF4 302 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 PM20D2Q8IYS1 436 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 MUC20Q8N307 709 aaPredicted RBP3.19□□□□□ -1.9
OTUD4-207ENST00000509517 MAB21L3Q8N8X9 362 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 UTP15Q8TED0 518 aaKnown RBP3.19□□□□□ -1.9
OTUD4-207ENST00000509517 TIGD1Q96MW7 591 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 GAD1Q99259 594 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 NEURL2Q9BR09 285 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 SRSF8Q9BRL6 282 aaKnown RBP3.19□□□□□ -1.9
OTUD4-207ENST00000509517 CENPOQ9BU64 300 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 TMEM39BQ9GZU3 492 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 SYNCQ9H7C4 482 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 ABCF3Q9NUQ8 709 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 KLHL9Q9P2J3 617 aa3.19□□□□□ -1.9
OTUD4-207ENST00000509517 ZCWPW2A0A1B0GU75 182 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 A0A1W2PR77 199 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 OR5K3A6NET4 321 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 AGAP14A8MT82 685 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 VILLO15195 856 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 EIF3DO15371 548 aaKnown RBP eCLIP3.18□□□□□ -1.9
OTUD4-207ENST00000509517 GRID2O43424 1007 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 PLPP2O43688 288 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 XPNPEP2O43895 674 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 GPC4O75487 556 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 ZNF432O94892 652 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 KCNA5P22460 613 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 NAP1L1P55209 391 aaKnown RBP3.18□□□□□ -1.9
OTUD4-207ENST00000509517 EEF1A1P68104 462 aaKnown RBP3.18□□□□□ -1.9
OTUD4-207ENST00000509517 PLIN5Q00G26 463 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 MVPQ14764 893 aaKnown RBP3.18□□□□□ -1.9
OTUD4-207ENST00000509517 RAB6CQ53S08 254 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 EEF1A1P5Q5VTE0 462 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 OR7E24Q6IFN5 339 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 CUZD1Q86UP6 607 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 EMC1Q8N766 993 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 NUDCD1Q96RS6 583 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 GFI1Q99684 422 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 SEMA3CQ99985 751 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 C1QTNF1Q9BXJ1 281 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 RAB6CQ9H0N0 254 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 TMX4Q9H1E5 349 aaPredicted RBP3.18□□□□□ -1.9
OTUD4-207ENST00000509517 GHITMQ9H3K2 345 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 PAG1Q9NWQ8 432 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 CMAHPQ9Y471 501 aa3.18□□□□□ -1.9
OTUD4-207ENST00000509517 CTAGE9A4FU28 777 aa3.17□□□□□ -1.9
OTUD4-207ENST00000509517 TMEM8BA6NDV4 472 aa3.17□□□□□ -1.9
OTUD4-207ENST00000509517 C16orf97H3BN30 126 aa3.17□□□□□ -1.9
OTUD4-207ENST00000509517 TMEM178BH3BS89 294 aa3.17□□□□□ -1.9
OTUD4-207ENST00000509517 TMCC2O75069 709 aa3.17□□□□□ -1.9
OTUD4-207ENST00000509517 ZNF217O75362 1048 aa3.17□□□□□ -1.9
OTUD4-207ENST00000509517 IGKV3-20P01619 116 aa3.17□□□□□ -1.9
OTUD4-207ENST00000509517 IGLV2-11P01706 119 aa3.17□□□□□ -1.9
OTUD4-207ENST00000509517 CTAGE8P0CG41 777 aa3.17□□□□□ -1.9
OTUD4-207ENST00000509517 CETPP11597 493 aa3.17□□□□□ -1.9
OTUD4-207ENST00000509517 HRH2P25021 359 aa3.17□□□□□ -1.9
OTUD4-207ENST00000509517 HOXD13P35453 343 aa3.17□□□□□ -1.9
OTUD4-207ENST00000509517 FMO5P49326 533 aa3.17□□□□□ -1.9
OTUD4-207ENST00000509517 AMPHP49418 695 aa3.17□□□□□ -1.9
OTUD4-207ENST00000509517 MC1RQ01726 317 aa3.17□□□□□ -1.9
OTUD4-207ENST00000509517 CREB5Q02930 508 aa3.17□□□□□ -1.9
OTUD4-207ENST00000509517 MEA1Q16626 185 aa3.17□□□□□ -1.9
OTUD4-207ENST00000509517 DUSP28Q4G0W2 176 aa3.17□□□□□ -1.9
OTUD4-207ENST00000509517 ITPRIPL1Q6GPH6 555 aa3.17□□□□□ -1.9
OTUD4-207ENST00000509517 MZT2BQ6NZ67 158 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms