RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 LOC285095A0A1B0GVY8 99 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 AGRPO00253 132 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 POLR1CO15160 346 aaPredicted RBP13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 RAD1O60671 282 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 PMPCBO75439 489 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 EML2O95834 649 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 MT-CYBP00156 380 aaPredicted RBP13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 PYGMP11217 842 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 TNNT1P13805 278 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 BPIP17213 487 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 AMD1P17707 334 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 MPSTP25325 297 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 CYLC1P35663 651 aaPredicted RBP13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 CETN2P41208 172 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 COPS2P61201 443 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 ABHD18Q0P651 414 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 XRCC4Q13426 336 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 LINC00303Q3SY05 128 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 SNAP47Q5SQN1 464 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 KLHL35Q6PF15 583 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 BORAQ6PGQ7 559 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 NPNTQ6UXI9 565 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 SPOCD1Q6ZMY3 1216 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 TMEM26Q6ZUK4 368 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 GDAP1Q8TB36 358 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 EXTL1Q92935 676 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 EID2BQ96D98 161 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 RTP4Q96DX8 246 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 ZDHHC12Q96GR4 267 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 CEP41Q9BYV8 373 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 PRDM8Q9NQV8 689 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 GEMIN8Q9NWZ8 242 aaKnown RBP13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 OCIAD1Q9NX40 245 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 TUBD1Q9UJT1 453 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 PILRAQ9UKJ1 303 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 EFR3BQ9Y2G0 817 aa13.4□□□□□ -0.26
CCHCR1-227ENST00000508852 PDZK1P1A8MUH7 402 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 ANXA9O76027 345 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 UBXN7O94888 489 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 IPO7O95373 1038 aaKnown RBP13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 LCA5LO95447 670 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 SLC4A1P02730 911 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 C9P02748 559 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 SPAM1P38567 509 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 MAPK9P45984 424 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 WNT3AP56704 352 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 PDE1BQ01064 536 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 TMEM115Q12893 351 aaPredicted RBP13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 TBX2Q13207 712 aaPredicted RBP13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 IL11RAQ14626 422 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 PPP2R5EQ16537 467 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 TBR1Q16650 682 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 CRTC2Q53ET0 693 aaPredicted RBP13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 KAZNQ674X7 775 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 ANKS6Q68DC2 871 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 ITPRIPL1Q6GPH6 555 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 C11orf63Q6NUN7 778 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 SARM1Q6SZW1 724 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 PID1Q7Z2X4 250 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 ZNF761Q86XN6 746 aaPredicted RBP13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 CCDC50Q8IVM0 306 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 ESX1Q8N693 406 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 BEND7Q8N7W2 519 aaPredicted RBP13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 EXD3Q8N9H8 876 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 SPATA22Q8NHS9 363 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 HTR3CQ8WXA8 447 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 HAUS1Q96CS2 278 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 CXorf40BQ96DE9 158 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 SLC45A3Q96JT2 553 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 C19orf43Q9BQ61 176 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 FSD1LQ9BXM9 530 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 SLC12A9Q9BXP2 914 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 SEMA4CQ9C0C4 833 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 RAB33BQ9H082 229 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 GPN2Q9H9Y4 310 aaPredicted RBP13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 STARD5Q9NSY2 213 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 TMEM9Q9P0T7 183 aa13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 TMEM184BQ9Y519 407 aaPredicted RBP13.39□□□□□ -0.27
CCHCR1-227ENST00000508852 A8MU76 341 aa13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 SLC28A2O43868 658 aa13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 STK10O94804 968 aaKnown RBP13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 PIRTP0C851 137 aa13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 CCR10P46092 362 aa13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 GEMP55040 296 aa13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 DMPKQ09013 629 aa13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 WASHC5Q12768 1159 aa13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 SLC1A5Q15758 541 aa13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 SIRPB2Q5JXA9 342 aa13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 CCDC181Q5TID7 509 aa13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 CRTC3Q6UUV7 619 aa13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 GLT6D1Q7Z4J2 308 aa13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 AMZ2Q86W34 360 aa13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 BPHLQ86WA6 291 aaPredicted RBP13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 TRAPPC5Q8IUR0 188 aa13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 C9orf72Q96LT7 481 aa13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 QKIQ96PU8 341 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 SPRY4Q9C004 299 aa13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 TRIM5Q9C035 493 aa13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 EPHA6Q9UF33 1036 aa13.38□□□□□ -0.27
CCHCR1-227ENST00000508852 AAR2Q9Y312 384 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms