RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 SH3RF2Q8TEC5 729 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 EZH1Q92800 747 aaPredicted RBP10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 SGF29Q96ES7 293 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 MARK4Q96L34 752 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 SLC46A2Q9BY10 475 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 COQ10BQ9H8M1 238 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 CCDC167Q9P0B6 97 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 SLC8A2Q9UPR5 921 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 CRYL1Q9Y2S2 319 aa10.94□□□□□ -0.66
SH3RF1-203ENST00000508685 A0A1W2PPC1 479 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 CCDC162PA2VCL2 907 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 FBP2O00757 339 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 TCN1P20061 433 aaPredicted RBP10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 IL10P22301 178 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 SLC7A9P82251 487 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 ACVR1Q04771 509 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 FOXM1Q08050 763 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 TRAF2Q12933 501 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 GRIK2Q13002 908 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 INPP5AQ14642 412 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 MYLK3Q32MK0 819 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 HABP4Q5JVS0 413 aaKnown RBP10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 ZNF678Q5SXM1 525 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 ATXN7L2Q5T6C5 722 aaPredicted RBP10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 KRT80Q6KB66 452 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 GLT6D1Q7Z4J2 308 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 CAMK1DQ8IU85 385 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 FAM217AQ8IXS0 508 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 ELMOD1Q8N336 334 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 METTL25Q8N6Q8 603 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 MDGA1Q8NFP4 955 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 OR6K2Q8NGY2 324 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 FAM81AQ8TBF8 368 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 TCEAL4Q96EI5 215 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 ALG14Q96F25 216 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 RAD9AQ99638 391 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 CCT7Q99832 543 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 C17orf80Q9BSJ5 609 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 ANKRD60Q9BZ19 345 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 TM6SF2Q9BZW4 377 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 GRIP2Q9C0E4 1043 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 GSTO2Q9H4Y5 243 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 PFDN4Q9NQP4 134 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 ASAH2Q9NR71 780 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 GID8Q9NWU2 228 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 LHX3Q9UBR4 397 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 LSM7Q9UK45 103 aaKnown RBP10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 RIMKLBQ9ULI2 386 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 SH3BP1Q9Y3L3 701 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 RAI2Q9Y5P3 530 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 DENND4CQ5VZ89 1909 aa10.93□□□□□ -0.66
SH3RF1-203ENST00000508685 TRAV19A0A0A6YYK7 116 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 KANSL1LA0AUZ9 987 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 PRORSD1PA6NEY8 169 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 H3BNH8 94 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 LEFTY2O00292 366 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 ARHGEF15O94989 841 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 WISP3O95389 354 aaPredicted RBP10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 S1PR4O95977 384 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 FCGR1AP12314 374 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 ATP6V1B1P15313 513 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 CLCN4P51793 760 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 CDKN2DP55273 166 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 HERVK_113P63132 956 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 INTS11Q5TA45 600 aaKnown RBP10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 ZNF783Q6ZMS7 281 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 ZBTB49Q6ZSB9 765 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 HTR3DQ70Z44 454 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 PIM3Q86V86 326 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 ERI1Q8IV48 349 aaKnown RBP10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 MINDY1Q8N5J2 469 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 MRPL43Q8N983 215 aaKnown RBP10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 MFSD2AQ8NA29 543 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 RHEBL1Q8TAI7 183 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 POF1BQ8WVV4 589 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 LRTOMTQ8WZ04 291 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 TCF12Q99081 682 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 ERVK-6Q9BXR3 956 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 EMILIN2Q9BXX0 1053 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 CCM2LQ9NUG4 571 aaPredicted RBP10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 TMEM45AQ9NWC5 275 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 SNX13Q9Y5W8 968 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 IRAK3Q9Y616 596 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 PRRC2BQ5JSZ5 2229 aaKnown RBP10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 ANKRD36A6QL64 1941 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 ZNF701M0R085 212 aaPredicted RBP10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 CD3EAPO15446 510 aaKnown RBP10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 SMAD6O43541 496 aaKnown RBP10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 RPP40O75818 363 aaKnown RBP10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 SUPT7LO94864 414 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 BMP10O95393 424 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 MATN4O95460 622 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 GLP2RO95838 553 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 HSD17B1P14061 328 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 IRS1P35568 1242 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 BMPR1AP36894 532 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 ALDH3B2P48448 385 aa10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 MRPL19P49406 292 aaKnown RBP10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 CDK9P50750 372 aaKnown RBP10.92□□□□□ -0.66
SH3RF1-203ENST00000508685 ZNF140P52738 457 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms