RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 FASTKQ14296 549 aaKnown RBP17.47■□□□□ 0.39
SFXN1-208ENST00000507823 PCBP2Q15366 365 aaKnown RBP eCLIP17.47■□□□□ 0.398e-6■■□□□ 13.7
SFXN1-208ENST00000507823 TAF11Q15544 211 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 SLC5A9Q2M3M2 681 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 OGFOD2Q6N063 350 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 SBSNQ6UWP8 590 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 GK5Q6ZS86 529 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 EFL1Q7Z2Z2 1120 aaKnown RBP17.47■□□□□ 0.39
SFXN1-208ENST00000507823 ADAMTSL2Q86TH1 951 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 OTUB2Q96DC9 234 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 CCDC97Q96F63 343 aaPredicted RBP17.47■□□□□ 0.39
SFXN1-208ENST00000507823 SPHK2Q9NRA0 654 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 SLC25A13Q9UJS0 675 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 PPM1HQ9ULR3 514 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 IQCF5A8MTL0 148 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 E2F3O00716 465 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 PIP5K1BO14986 540 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 GPX3P22352 226 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 DPP6P42658 865 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 VASPP50552 380 aaPredicted RBP17.46■□□□□ 0.39
SFXN1-208ENST00000507823 TGFBIQ15582 683 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 CHRNA6Q15825 494 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 C8orf82Q6P1X6 216 aaPredicted RBP17.46■□□□□ 0.39
SFXN1-208ENST00000507823 DNAJC9Q8WXX5 260 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 PLEKHG4BQ96PX9 1271 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 ZNF225Q9UK10 706 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 FNDC3AQ9Y2H6 1198 aaKnown RBP17.46■□□□□ 0.39
SFXN1-208ENST00000507823 A0A1B0GTL3 188 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 AGTR2P50052 363 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 CAMK1Q14012 370 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 XKR7Q5GH72 579 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 USP45Q70EL2 814 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 ADIPOR2Q86V24 386 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 NXPE1Q8N323 547 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 KIAA1958Q8N8K9 716 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 PDPRQ8NCN5 879 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 ZNF382Q96SR6 550 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 CDRT15Q96T59 188 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 SLC25A23Q9BV35 468 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 BOCQ9BWV1 1114 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 PRSS21Q9Y6M0 314 aa17.46■□□□□ 0.39
SFXN1-208ENST00000507823 FBP2O00757 339 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 SNRPB2P08579 225 aaKnown RBP17.45■□□□□ 0.38
SFXN1-208ENST00000507823 HSPA8P11142 646 aaKnown RBP17.45■□□□□ 0.38
SFXN1-208ENST00000507823 CCNHP51946 323 aaPredicted RBP17.45■□□□□ 0.38
SFXN1-208ENST00000507823 ART3Q13508 389 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 GPRC6AQ5T6X5 926 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 ZDHHC20Q5W0Z9 365 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 PTRHD1Q6GMV3 140 aaKnown RBP17.45■□□□□ 0.38
SFXN1-208ENST00000507823 ELMSAN1Q6PJG2 1045 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 TSPAN33Q86UF1 283 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 CHCHD4Q8N4Q1 142 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 OR56A4Q8NGH8 313 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 CCT7Q99832 543 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 MRPL1Q9BYD6 325 aaKnown RBP17.45■□□□□ 0.38
SFXN1-208ENST00000507823 SLC2A11Q9BYW1 496 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 CIPCQ9C0C6 399 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 CACNA2D2Q9NY47 1150 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 MKI67P46013 3256 aaKnown RBP17.45■□□□□ 0.38
SFXN1-208ENST00000507823 IGLV3-16A0A075B6K0 115 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 TLL1O43897 1013 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 MATN4O95460 622 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 UROSP10746 265 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 THOP1P52888 689 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 PKNOX1P55347 436 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 SESN3P58005 492 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 ECT2LQ008S8 904 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 CEACAM7Q14002 265 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 DPY19L3Q6ZPD9 716 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 SYVN1Q86TM6 617 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 FUNDC1Q8IVP5 155 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 GPR26Q8NDV2 337 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 LKAAEAR1Q8TD35 194 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 BBS2Q9BXC9 721 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 PCDHGA7Q9Y5G6 932 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 SLC4A7Q9Y6M7 1214 aa17.45■□□□□ 0.38
SFXN1-208ENST00000507823 GRIK2Q13002 908 aa17.44■□□□□ 0.38
SFXN1-208ENST00000507823 AGKQ53H12 422 aa17.44■□□□□ 0.38
SFXN1-208ENST00000507823 TCHHL1Q5QJ38 904 aaPredicted RBP17.44■□□□□ 0.38
SFXN1-208ENST00000507823 FAM219BQ5XKK7 198 aa17.44■□□□□ 0.38
SFXN1-208ENST00000507823 RNF111Q6ZNA4 994 aa17.44■□□□□ 0.38
SFXN1-208ENST00000507823 KCNA7Q96RP8 456 aa17.44■□□□□ 0.38
SFXN1-208ENST00000507823 NPAS2Q99743 824 aa17.44■□□□□ 0.38
SFXN1-208ENST00000507823 C17orf80Q9BSJ5 609 aa17.44■□□□□ 0.38
SFXN1-208ENST00000507823 FBRSL1Q9HCM7 1045 aaKnown RBP17.44■□□□□ 0.38
SFXN1-208ENST00000507823 SEMA4BQ9NPR2 832 aaPredicted RBP17.44■□□□□ 0.38
SFXN1-208ENST00000507823 POLG2Q9UHN1 485 aa17.44■□□□□ 0.38
SFXN1-208ENST00000507823 FBXO10Q9UK96 956 aa17.44■□□□□ 0.38
SFXN1-208ENST00000507823 TNPO3Q9Y5L0 923 aaKnown RBP17.44■□□□□ 0.38
SFXN1-208ENST00000507823 NEDD8-MDP1E9PL57 170 aa17.44■□□□□ 0.38
SFXN1-208ENST00000507823 SNX2O60749 519 aa17.44■□□□□ 0.38
SFXN1-208ENST00000507823 CHRM1P11229 460 aaPredicted RBP17.44■□□□□ 0.38
SFXN1-208ENST00000507823 TYRP14679 529 aa17.44■□□□□ 0.38
SFXN1-208ENST00000507823 LBPP18428 481 aa17.44■□□□□ 0.38
SFXN1-208ENST00000507823 LHCGRP22888 699 aa17.44■□□□□ 0.38
SFXN1-208ENST00000507823 PTSQ03393 145 aa17.44■□□□□ 0.38
SFXN1-208ENST00000507823 LRRC66Q68CR7 880 aa17.44■□□□□ 0.38
SFXN1-208ENST00000507823 REP15Q6BDI9 236 aa17.44■□□□□ 0.38
SFXN1-208ENST00000507823 CCDC124Q96CT7 223 aaKnown RBP17.44■□□□□ 0.38
SFXN1-208ENST00000507823 HGH1Q9BTY7 390 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms