RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 GPR89AB7ZAQ6 455 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 QSOX1O00391 747 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 PRMT5O14744 637 aaPredicted RBP7.12□□□□□ -1.27
NUP54-204ENST00000506098 FPGTO14772 594 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 CHUKO15111 745 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 SLC31A1O15431 190 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 SGTAO43765 313 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 VEGFDO43915 354 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 OR1I1O60431 355 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 LILRB5O75023 590 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 KRT38O76015 456 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 AP2A2O94973 939 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 SLC25A14O95258 325 aaPredicted RBP7.12□□□□□ -1.27
NUP54-204ENST00000506098 ESR1P03372 595 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 PCCBP05166 539 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 ITGA2BP08514 1039 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 SNRPAP09012 282 aaKnown RBP7.12□□□□□ -1.27
NUP54-204ENST00000506098 GPR89BP0CG08 455 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 MYCLP1P12525 358 aaPredicted RBP7.12□□□□□ -1.27
NUP54-204ENST00000506098 ATP1B2P14415 290 aaPredicted RBP7.12□□□□□ -1.27
NUP54-204ENST00000506098 BCKDHBP21953 392 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 CD27P26842 260 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 AKT2P31751 481 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 MAGEA12P43365 314 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 KIAA1024LP59773 190 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 PFN3P60673 137 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 CBX1P83916 185 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 CDK3Q00526 305 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 RPL6Q02878 288 aaKnown RBP7.12□□□□□ -1.27
NUP54-204ENST00000506098 TMEM115Q12893 351 aaPredicted RBP7.12□□□□□ -1.27
NUP54-204ENST00000506098 INPP5AQ14642 412 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 TERF2Q15554 542 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 KRT71Q3SY84 523 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 KHDC1Q4VXA5 237 aaKnown RBP7.12□□□□□ -1.27
NUP54-204ENST00000506098 CTSL3PQ5NE16 218 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 CEP85LQ5SZL2 805 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 LGSNQ5TDP6 509 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 FAM45BPQ6NSW5 357 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 ZNF549Q6P9A3 640 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 KYAT3Q6YP21 454 aaKnown RBP7.12□□□□□ -1.27
NUP54-204ENST00000506098 MACC1Q6ZN28 852 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 GCNT7Q6ZNI0 430 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 TAOK1Q7L7X3 1001 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 ABI3BPQ7Z7G0 1075 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 ADGRG6Q86SQ4 1221 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 IQCHQ86VS3 1027 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 HEATR4Q86WZ0 1026 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 SLC41A1Q8IVJ1 513 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 CYP4X1Q8N118 509 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 PNPLA1Q8N8W4 532 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 ZBTB44Q8NCP5 570 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 C1orf216Q8TAB5 229 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 FAM45AQ8TCE6 357 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 FUBP1Q96AE4 644 aaKnown RBP7.12□□□□□ -1.27
NUP54-204ENST00000506098 SCARF2Q96GP6 870 aaPredicted RBP7.12□□□□□ -1.27
NUP54-204ENST00000506098 VPS39Q96JC1 886 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 ZC3H10Q96K80 434 aaKnown RBP7.12□□□□□ -1.27
NUP54-204ENST00000506098 RUFY1Q96T51 708 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 COPS8Q99627 209 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 AARSD1Q9BTE6 412 aaKnown RBP7.12□□□□□ -1.27
NUP54-204ENST00000506098 BOCQ9BWV1 1114 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 ACBD3Q9H3P7 528 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 TMBIM4Q9HC24 238 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 ZSCAN32Q9NX65 697 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.12□□□□□ -1.27
NUP54-204ENST00000506098 CTNNAL1Q9UBT7 734 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 GPR34Q9UPC5 381 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 FNDC3AQ9Y2H6 1198 aaKnown RBP7.12□□□□□ -1.27
NUP54-204ENST00000506098 CRYL1Q9Y2S2 319 aa7.12□□□□□ -1.27
NUP54-204ENST00000506098 MTO1Q9Y2Z2 717 aaKnown RBP7.12□□□□□ -1.27
NUP54-204ENST00000506098 OAS3Q9Y6K5 1087 aaKnown RBP7.12□□□□□ -1.27
NUP54-204ENST00000506098 ASCC3Q8N3C0 2202 aaKnown RBP7.11□□□□□ -1.27
NUP54-204ENST00000506098 FAM95CA0A1B0GW59 222 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 UBA6A0AVT1 1052 aaPredicted RBP7.11□□□□□ -1.27
NUP54-204ENST00000506098 TLDC2A0PJX2 215 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 A6NNZ2 444 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 CFAP99D6REC4 459 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 F8W8V4 182 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 H3BMM5 538 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 INPP4BO15327 924 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 MAP3K13O43283 966 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 GALR2O43603 387 aaPredicted RBP7.11□□□□□ -1.27
NUP54-204ENST00000506098 OPA1O60313 960 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 KRT37O76014 449 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 FSBPO95073 299 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 WISP3O95389 354 aaPredicted RBP7.11□□□□□ -1.27
NUP54-204ENST00000506098 SYF2O95926 243 aaKnown RBP7.11□□□□□ -1.27
NUP54-204ENST00000506098 GSTM1P09488 218 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 SP9P0CG40 484 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 RALBP11234 206 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 PKMP14618 531 aaKnown RBP7.11□□□□□ -1.27
NUP54-204ENST00000506098 MSH3P20585 1137 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 FDXRP22570 491 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 SLCO1A2P46721 670 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 RABIFP47224 123 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 RACK1P63244 317 aaKnown RBP7.11□□□□□ -1.27
NUP54-204ENST00000506098 TIAL1Q01085 375 aaKnown RBP eCLIP7.11□□□□□ -1.27
NUP54-204ENST00000506098 POU4F1Q01851 419 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 GSTM4Q03013 218 aa7.11□□□□□ -1.27
NUP54-204ENST00000506098 ANGPT1Q15389 498 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms