RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 A6NCN8 305 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 C9orf172C9J069 976 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 ERVH48-1M5A8F1 160 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 TK2O00142 265 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 ANXA9O76027 345 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 CDK14O94921 469 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 TJP3O95049 919 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 RBP3P10745 1247 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 THRAP10827 490 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 CCL4P13236 92 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 ZNF7P17097 686 aaPredicted RBP8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 MPSTP25325 297 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 CSTF2P33240 577 aaKnown RBP eCLIP8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 PTPN7P35236 360 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 SPAM1P38567 509 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 EPHA4P54764 986 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 EIF3EP60228 445 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 TMEM115Q12893 351 aaPredicted RBP8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 NFATC2Q13469 925 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 GTF2H3Q13889 308 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 ATP13A5Q4VNC0 1218 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 CDKL3Q8IVW4 592 aaPredicted RBP8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 TXLNBQ8N3L3 684 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 TTC30BQ8N4P2 665 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 LRRC57Q8N9N7 239 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 AVL9Q8NBF6 648 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 LSM14AQ8ND56 463 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 AGBL5Q8NDL9 886 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 CCDC112Q8NEF3 446 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 GDAP1Q8TB36 358 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 ACTL9Q8TC94 416 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 BRSK1Q8TDC3 778 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 SNRNP27Q8WVK2 155 aaKnown RBP8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 ALG3Q92685 438 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 TTC25Q96NG3 672 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 TIMM29Q9BSF4 260 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 B3GNT4Q9C0J1 378 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 PRDM8Q9NQV8 689 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 FOXJ2Q9P0K8 574 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 IL17CQ9P0M4 197 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 TMEM9Q9P0T7 183 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 CPNE7Q9UBL6 633 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 DNAJC16Q9Y2G8 782 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 PKP3Q9Y446 797 aa8.36□□□□□ -1.07
HMGXB4-207ENST00000498212 PIKFYVEQ9Y2I7 2098 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 GLYATL1P3A0A0U1RQE8 302 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 GRID2IPA4D2P6 1211 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 LILRA5A6NI73 299 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 PDZK1P1A8MUH7 402 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 KCNN4O15554 427 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 BUD23O43709 281 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 PPFIA2O75334 1257 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 STK10O94804 968 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 AGTP01019 485 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 PRB1P04280 392 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 PYGMP11217 842 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 FGF3P11487 239 aaPredicted RBP8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 VCLP18206 1134 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 CD82P27701 267 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 PSMB4P28070 264 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 MAPK9P45984 424 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 KIF5AQ12840 1032 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 ITGA9Q13797 1035 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 PRPSAP1Q14558 356 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 TGIF1Q15583 401 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 CHRNA6Q15825 494 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 SEPT7Q16181 437 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 KHDC1Q4VXA5 237 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 TAF1BQ53T94 588 aaPredicted RBP8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 ANKRD20A2Q5SQ80 823 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 LDLRAP1Q5SW96 308 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 ANKRD20A1Q5TYW2 823 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 ANKRD20A3Q5VUR7 823 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 AADACL2Q6P093 401 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 DARS2Q6PI48 645 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 WDR74Q6RFH5 385 aaPredicted RBP8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 FAM151BQ6UXP7 276 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 PEX26Q7Z412 305 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 ZFAND4Q86XD8 727 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 FAM129CQ86XR2 697 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 TRAPPC5Q8IUR0 188 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 TMEM139Q8IV31 216 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 ZNF547Q8IVP9 402 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 TRIM48Q8IWZ4 208 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 SYCE1Q8N0S2 351 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 DTX3LQ8TDB6 740 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 NCSTNQ92542 709 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 ART4Q93070 314 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 TAAR9Q96RI9 348 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 FAM118BQ9BPY3 351 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 GORASP1Q9BQQ3 440 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 FICDQ9BVA6 458 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 ZCCHC2Q9C0B9 1178 aaKnown RBP8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 EPB41L1Q9H4G0 881 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 IL26Q9NPH9 171 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 PDP2Q9P2J9 529 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 IMPACTQ9P2X3 320 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 SLC23A2Q9UGH3 650 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 AMFRQ9UKV5 643 aa8.35□□□□□ -1.07
HMGXB4-207ENST00000498212 TMPRSS11EQ9UL52 423 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms