RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 PIK3CGP48736 1102 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 NUDT2P50583 147 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 ATP4BP51164 291 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 CCNHP51946 323 aaPredicted RBP6.86□□□□□ -1.31
USP39-219ENST00000496047 INHBCP55103 352 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 PKNOX1P55347 436 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 ECT2LQ008S8 904 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 LCP2Q13094 533 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 KLF10Q13118 480 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 TUBB3Q13509 450 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 NAA25Q14CX7 972 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 RBBP7Q16576 425 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 KIF19Q2TAC6 998 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 LSM12Q3MHD2 195 aaKnown RBP6.86□□□□□ -1.31
USP39-219ENST00000496047 PREPLQ4J6C6 727 aaPredicted RBP6.86□□□□□ -1.31
USP39-219ENST00000496047 CARD16Q5EG05 197 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 CES4AQ5XG92 561 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 PSAPL1Q6NUJ1 521 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 BRAT1Q6PJG6 821 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 Q7L0L9 218 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 ISCA2Q86U28 154 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 PIM3Q86V86 326 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 GPSM1Q86YR5 675 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 MFSD6LQ8IWD5 586 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 ULK2Q8IYT8 1036 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 SPATA6LQ8N4H0 392 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 CPSF7Q8N684 471 aaKnown RBP6.86□□□□□ -1.31
USP39-219ENST00000496047 RBM15BQ8NDT2 890 aaKnown RBP6.86□□□□□ -1.31
USP39-219ENST00000496047 SNIP1Q8TAD8 396 aaKnown RBP6.86□□□□□ -1.31
USP39-219ENST00000496047 SHKBP1Q8TBC3 707 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 AGAP11Q8TF27 550 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 SLC22A17Q8WUG5 538 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 IRF7Q92985 503 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 WBP2Q969T9 261 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 TIFAQ96CG3 184 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 VWCEQ96DN2 955 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 ALG14Q96F25 216 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 DCUN1D1Q96GG9 259 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 LRIG1Q96JA1 1093 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 CATSPER2Q96P56 530 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 PLEKHG4BQ96PX9 1271 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 LYSMD1Q96S90 227 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 SLC46A2Q9BY10 475 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 MRPL1Q9BYD6 325 aaKnown RBP6.86□□□□□ -1.31
USP39-219ENST00000496047 TRIM54Q9BYV2 358 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 UNKQ9C0B0 810 aaKnown RBP6.86□□□□□ -1.31
USP39-219ENST00000496047 LMAN2LQ9H0V9 348 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 SUV39H2Q9H5I1 410 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 EFCAB1Q9HAE3 211 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 MEAF6Q9HAF1 191 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 BPIFA1Q9NP55 256 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 MID1IP1Q9NPA3 183 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 PLK2Q9NYY3 685 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 MARK1Q9P0L2 795 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 EPS15L1Q9UBC2 864 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 HECAQ9UBI9 543 aaPredicted RBP6.86□□□□□ -1.31
USP39-219ENST00000496047 ZDHHC2Q9UIJ5 367 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 MRPS23Q9Y3D9 190 aaKnown RBP6.86□□□□□ -1.31
USP39-219ENST00000496047 ANGPTL3Q9Y5C1 460 aa6.86□□□□□ -1.31
USP39-219ENST00000496047 OAS3Q9Y6K5 1087 aaKnown RBP6.86□□□□□ -1.31
USP39-219ENST00000496047 MUC22E2RYF6 1773 aaPredicted RBP6.86□□□□□ -1.31
USP39-219ENST00000496047 BRCA2P51587 3418 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 LINC01553A4QN01 128 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 ERVH48-1M5A8F1 160 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 UBXN8O00124 270 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 ZNF195O14628 629 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 SCAMP3O14828 347 aaKnown RBP6.85□□□□□ -1.31
USP39-219ENST00000496047 AZIN1O14977 448 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 CD160O95971 181 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 SBK3P0C264 359 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 ADH5P11766 374 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 ENO3P13929 434 aaPredicted RBP6.85□□□□□ -1.31
USP39-219ENST00000496047 TYRP14679 529 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 HNRNPLP14866 589 aaKnown RBP eCLIP6.85□□□□□ -1.31
USP39-219ENST00000496047 GJA1P17302 382 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 VCLP18206 1134 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 SP100P23497 879 aaPredicted RBP6.85□□□□□ -1.31
USP39-219ENST00000496047 ACRV1P26436 265 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 EPHA3P29320 983 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 EEF1DP29692 281 aaKnown RBP6.85□□□□□ -1.31
USP39-219ENST00000496047 GMPRP36959 345 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 NSG1P42857 185 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 MAPK9P45984 424 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 ERVFC1P60507 584 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 TBL3Q12788 808 aaKnown RBP6.85□□□□□ -1.31
USP39-219ENST00000496047 NFATC2Q13469 925 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 PEX6Q13608 980 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 SEMA3AQ14563 771 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 PTPRCAPQ14761 206 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 RPS6KA2Q15349 733 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 ZNF77Q15935 545 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 PFKFB4Q16877 469 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 MUM1Q2TAK8 710 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 ZNF284Q2VY69 593 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 MYLK3Q32MK0 819 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 FUT11Q495W5 492 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 LCE2CQ5TA81 110 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 VWA5B1Q5TIE3 1220 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 ICE2Q659A1 982 aa6.85□□□□□ -1.31
USP39-219ENST00000496047 ERAP2Q6P179 960 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms